Stenotrophomonas geniculata: RKE57_15180
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Entry
RKE57_15180 CDS
T09411
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen03030
DNA replication
sgen03430
Mismatch repair
sgen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RKE57_15180 (holA)
03430 Mismatch repair
RKE57_15180 (holA)
03440 Homologous recombination
RKE57_15180 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgen03032
]
RKE57_15180 (holA)
03400 DNA repair and recombination proteins [BR:
sgen03400
]
RKE57_15180 (holA)
Enzymes [BR:
sgen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RKE57_15180 (holA)
DNA replication proteins [BR:
sgen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RKE57_15180 (holA)
DNA repair and recombination proteins [BR:
sgen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RKE57_15180 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
HP_1247_M
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
WNF09397
LinkDB
All DBs
Position
complement(3272058..3273095)
Genome browser
AA seq
345 aa
AA seq
DB search
MELRPEQLASQGADTALAPVYLIAGPETLRVLEAADAIRARARAAGIGEREVFDADGRDF
DWNQLDASFNAPSLFSARRLVEVRLPSGKPGKDGAEVISQFCANPAPDVVLMITANEWSK
AHQGKWAEAVNRIGVLSVAWAIKPHELPDWIERRLRGKGLRADPAAVQRLAERVEGNLLA
AAQEIDKLALLADGQPLDVERMESLVADAARYDVFRLVEATFSGQPPAVLRMLAGLRGEG
EAVAALMPMVIRELLAGAGLARVQARGGNLAAEMKSRGIWESRQAPYKRALQRHPESKRW
ERFVAEAGLVDRIAKGRADGDAWLALERLLVAVAEPRAVRLLARA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcgtccggagcagctggccagccagggcgctgataccgcgctggcgccggtc
tacctgattgccggcccggaaaccctgcgcgtgctggaggcggccgacgccatccgcgcg
cgcgcgcgcgccgccggcatcggcgagcgggaagtgttcgatgccgatggccgtgatttc
gactggaaccagctcgatgccagcttcaacgcgcccagcctgttcagcgcccgccgcctg
gtcgaggtgcgcctgcccagcggcaagccgggcaaggacggggccgaggtgatcagccag
ttctgcgccaatccggcgccggacgtggtgctgatgattaccgccaacgaatggagcaag
gcccaccagggcaagtgggccgaggcggtcaaccgcatcggcgtgctgtcggtggcttgg
gcgatcaagccgcacgaattgccggactggatcgagcgccgcctgcgtggcaagggcctg
cgcgcggacccggccgccgtgcagcgcctggccgagcgggtggaaggcaatctgctggct
gccgcccaggaaatcgacaagctggcgctgttggccgacggccagccgctggacgtggaa
cggatggaatcgctggtggccgacgccgcgcgctatgacgtgttccggctggtggaggcg
acgttctccgggcaaccgccggcggtgctgcgcatgctggccggcctgcgcggcgagggt
gaggcggtggctgcactgatgccgatggtgatccgcgaactgctggctggtgcaggcctg
gcccgggtgcaggcccgtggcggtaacctggccgccgagatgaaatcgcgcggcatctgg
gaatcgcggcaggcgccgtacaagcgcgcgctgcagcggcatccggaaagcaagcgctgg
gagcgcttcgtggccgaagccgggctggtcgaccgcatcgccaaggggcgcgccgacggt
gatgcctggctggcgctggagcgcctgctggtggccgtggccgaaccgcgtgccgtgcgc
ctgctggcgcgggcctga
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