Stenotrophomonas geniculata: RKE57_15530
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Entry
RKE57_15530 CDS
T09411
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen00071
Fatty acid degradation
sgen00280
Valine, leucine and isoleucine degradation
sgen00310
Lysine degradation
sgen00362
Benzoate degradation
sgen00380
Tryptophan metabolism
sgen00410
beta-Alanine metabolism
sgen00640
Propanoate metabolism
sgen00650
Butanoate metabolism
sgen00907
Pinene, camphor and geraniol degradation
sgen00930
Caprolactam degradation
sgen01100
Metabolic pathways
sgen01110
Biosynthesis of secondary metabolites
sgen01120
Microbial metabolism in diverse environments
sgen01200
Carbon metabolism
sgen01212
Fatty acid metabolism
Module
sgen_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RKE57_15530
00650 Butanoate metabolism
RKE57_15530
09103 Lipid metabolism
00071 Fatty acid degradation
RKE57_15530
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RKE57_15530
00310 Lysine degradation
RKE57_15530
00380 Tryptophan metabolism
RKE57_15530
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RKE57_15530
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RKE57_15530
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RKE57_15530
00930 Caprolactam degradation
RKE57_15530
Enzymes [BR:
sgen01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RKE57_15530
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RKE57_15530
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RKE57_15530
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Pyr_redox_2
MORN
ApbA
AlaDh_PNT_C
UDPG_MGDP_dh_N
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
WNF09463
LinkDB
All DBs
Position
3344097..3346160
Genome browser
AA seq
687 aa
AA seq
DB search
MLSGFDGLRFSHWHPEIRDDGVVVLSLDRQDSSVNAMSQDVLLELGDLLERIALDPPKGV
VIQSLKKAGFIAGADLKEFQEFDRRGTVNDAIRRGQATYQKLAELPCPTVAAIHGHCLGG
GTELALACRYRVASNDSSTRIGLPETQLGIFPGWGGSARLPQLVGAPAAMDMMLTGRTLS
ASAARGIGLVDKVVAPAVVLDTAVALALSGTTRPFKQRATAWATNTWLARTLLAPQMVKQ
VARKAKKDQYPAPYALISTWQRSGGKPIQARLDAERRAVVKLASTPTARNLIRIFFLTER
LKGLGGGDSGIRHVHVVGAGVMGGDIAAWAAYKGFEVTLQDREQRFIDPAMERAQALFAK
KVRDESKRPAVAARLRADLEGNGVAEADLVIEAIIENPEAKRALYQTLEPKMKLDALLTT
NTSSIPLVELRDHIQRPAQFAGLHYFNPVAQMPLVEIIHHDGMAPETERRLAAFCKALGK
FPVPVAGSPGFLVNRVLFPYMLEAATAYAEGIPGPVIDKAAVKFGMPMGPIELIDTVGLD
VAAGVGRELAPFLGLQIPAALQTVEPDKRGKKDGQGIYTWENGKPKKPDVASDYQAPADL
EDRLILPLLNEAVACLHEGVVADADLLDAGVIFGTGFAPFRGGPIQHIRAVGADAIVERL
KALQQRHGDRFAPRPGWDNPALREPVV
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgctctcaggcttcgatggtctccgcttcagccactggcaccccgagatccgcgacgac
ggcgtggtggttctctccctggatcgtcaggacagcagcgtcaacgccatgtcgcaggac
gtgctgctggaactgggcgacctgctcgagcgcattgcactggacccgcccaagggcgtg
gtgatccagtcgctgaagaaggccggcttcattgccggtgcggacctgaaggagttccag
gagttcgaccgccgcggcaccgtcaacgacgccatccgccgcggccaggccacttaccag
aagctggccgagctgccctgcccgaccgtggcggccatccacggccactgcctgggcggc
ggcaccgaactggcactggcctgccgctaccgcgtggcctccaatgacagcagcacgcgc
atcggcctgccggaaacccagctgggcatcttccccggctggggcggcagcgcgcgcctg
ccgcagctggtcggtgcgccggcagcgatggacatgatgctgaccggccgcaccttgtcg
gcctcggccgcgcgtggcatcggcctggtcgacaaggtggtggcgccggcggtggtgctc
gacaccgccgtggcgctggcgctgtccggcaccacccgcccgttcaagcagcgcgcgacg
gcctgggccaccaacacctggctggcacgcactttgctggcaccgcagatggtcaagcag
gtcgcacgcaaagccaagaaggaccagtacccggcgccctacgcgctgatcagcacctgg
cagcgcagcggcggcaagccgatccaggcgcgcctggatgccgaacgccgcgccgtggtg
aagctggccagcacgccgaccgcgcgcaacctgatccgcatcttcttcctgaccgagcgc
ctgaagggcctgggcggcggtgactccggcatccgccacgtgcacgtggtcggcgccggc
gtgatgggcggcgatatcgccgcgtgggccgcctacaagggcttcgaggtgacgctgcag
gaccgcgagcagcgcttcatcgacccggccatggaacgggcgcaggctctgttcgccaag
aaggtgcgcgacgagagcaagcgcccggcggtggccgcgcgcctgcgtgccgatctggaa
ggcaacggcgtggccgaggccgacctggtgatcgaagcgatcatcgagaacccggaagcc
aagcgtgcgctgtaccagacgctcgaaccgaagatgaagctggacgcgctgctgaccacc
aacacctcgtcgattccgctggtggaactgcgcgaccacatccagcgcccggcacagttc
gccggcctgcactacttcaacccggtggcgcagatgccgctggtggagatcatccatcac
gacggcatggcgccggagaccgagcgccgcctggccgcgttctgcaaggcgctgggcaaa
ttccccgtgccggtggccggcagcccgggcttcctggtcaaccgcgtgctgttcccgtac
atgctggaagccgccaccgcgtatgccgagggcattccgggcccggtgatcgacaaggcc
gcagtgaaattcggcatgccgatgggcccgatcgaactgatcgacaccgtgggcctggac
gtggccgcaggcgtcggccgcgaactggcgccgttcctgggcctgcagattccggccgca
ctgcagacggtggaaccggacaagcgtggcaagaaggacggccagggcatctacacctgg
gaaaacggcaagccgaagaagccggacgtggccagcgattaccaggccccggccgatctg
gaggaccgcctgatcctgccgctgttgaacgaggccgtggcgtgcctgcacgagggcgtg
gtggccgatgcggacctgctggatgcgggcgtgatcttcggtaccggtttcgccccgttc
cgcggcggtccgatccagcacatccgcgcagtgggagccgatgcgatcgtcgagcggttg
aaggcgctgcagcagcgccacggcgaccgtttcgccccgcgccccggctgggacaacccc
gccctgcgcgaaccagtggtttga
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