Stenotrophomonas geniculata: RKE57_15620
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Entry
RKE57_15620 CDS
T09411
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen00260
Glycine, serine and threonine metabolism
sgen00630
Glyoxylate and dicarboxylate metabolism
sgen00670
One carbon pool by folate
sgen00785
Lipoic acid metabolism
sgen01100
Metabolic pathways
sgen01110
Biosynthesis of secondary metabolites
sgen01200
Carbon metabolism
Module
sgen_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RKE57_15620 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RKE57_15620 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RKE57_15620 (gcvP)
00670 One carbon pool by folate
RKE57_15620 (gcvP)
Enzymes [BR:
sgen01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
RKE57_15620 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WNF09481
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Position
3367244..3370111
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AA seq
955 aa
AA seq
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MSQNTPSLRELEHHNAFVERHIGPNDAEIAQMLDVVGHASLDGMTDAIVPAKIKSPAPLA
LPESMTEVQALAKIRAIADKNTVLRSFIGQGYYGTHTPNVILRNILENPAWYTAYTPYQA
EISQGRMEALINFQTLCADLTGMEIANASLLDEATAAAEAMTLAKRSAKSKSDTFFVHDA
VHPQTLELLRTRAEPMGIVLRVGTPAEALEAEAFGLLLQYPDTFGQVGDYKALVDAVHAR
GGLVAVATDLLALTLLAAPGEWGADIVVGNSQRFGVPFGFGGPHAAFMACRDAYKRSMPG
RLIGVSVDAQGNPAYRLTLQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLTR
IARRTHRLASILAAALRNAGVQVGGDFFDTLHVTGVHADEIHAKARAAGYNLRAIDSDSV
GISLDETTTRADIVAVAAVFGASLDVDALDASTADALPAGLLRQSAFLTHPVFNTHHSEH
ELLRYLRSLADKDLAMDRTMIPLGSCTMKLNATAEMIPVTWPEFSQIHPLVPADQALGYK
ELIDTLEAMLVECTGYDAVSLQPNSGAQGEYAGLLAIRAYHRSRGEDHRDICLIPDSAHG
TNPASAQMCGMKVVVTKTDANGNVDVEDIRLNAEKYSDRLAAIMMTYPSTHGVFEEEVVE
ICEIIHKHGGQVYTDGANMNALVGVAKPGKWGSDVSHLNLHKTFCIPHGGGGPGVGPCAV
KEHLAPFLPGKLGDNGPVGMVSAASFGSASILPISWMYIAMMGREGLRKATQVAQLNANY
IAKRLAPHFKTLYTGRNGLVAHECILDVRPLEKTSGIGAEDVAKRLIDFGFHAPTLSFPV
AGTLMVEPTESESLHELDRFIDAMIQIREEITAIEDGRLDREDNPLKNAPHTATAVTASE
WTHAYPRELAAFPLASLKQSKYWPPVARVDNVYGDKNVMCACIPVDAYKDDEVEA
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagaacaccccttccctgcgtgagctcgagcaccacaacgcgttcgtcgagcgc
cacatcggccccaatgacgccgagatcgcgcagatgctcgatgtcgtcggccacgcgtcg
ctggatggcatgaccgatgccatcgtaccggccaagatcaagtcgccggcaccgctggcg
ctgccggagtcgatgaccgaagtacaggcactggcgaagatccgtgcgatcgccgacaag
aacaccgtgctgcgcagcttcatcggccagggctactacggcacccacacgccgaacgtg
atcctgcgcaacatcctggaaaacccggcctggtacaccgcctacactccgtaccaggcg
gaaatctcgcagggccgcatggaagcgctgatcaacttccagaccctgtgcgccgacctg
accggcatggaaatcgccaacgcctcgctgctggacgaagccaccgccgctgctgaagcg
atgaccctggccaagcgttcggccaagtccaagtcggacaccttcttcgtgcacgacgcc
gtgcatccgcagacgctggaactgctgcgtacccgcgccgaacccatgggcatcgtgctg
cgcgtcggcaccccggccgaagcgctggaagcggaagccttcggcctgctgctgcagtat
ccggataccttcggccaggtgggcgactacaaggcgctggtcgatgccgtgcacgcacgc
ggcggcctggtggccgtggccaccgacctgctggccctgaccctgctggccgccccgggc
gaatggggcgcggacatcgtggtcggcaacagccagcgtttcggcgtgccgttcggcttc
ggtggcccgcacgccgccttcatggcctgccgtgacgcctacaagcgctcgatgccgggc
cgcctgatcggtgtttcggtcgatgcccagggcaacccggcctaccgcctgaccctgcag
acccgcgagcagcacatccgccgcgagaaggccacctccaacatctgtaccgcgcaggtg
ctgctggcggtgatggcctcgatgtacgccgtttaccacggcccggaaggcctgacccgc
attgcccgccgcacccatcgcctggcctcgatcctggccgcagcgctgcgcaatgccggc
gtgcaggttggtggcgatttcttcgacaccctgcatgtcaccggcgtgcacgccgatgag
atccatgccaaggcccgcgccgccggctacaacctgcgcgcgatcgacagcgactcggtc
ggcatcagcctggacgagaccaccacccgcgccgacatcgtcgccgtggctgcggtgttc
ggtgcttcgctggacgtcgacgcgctggatgccagcaccgccgacgcgctgccggccggc
ctgctgcgccagtccgcgttcctgacccatccggtgttcaacacccaccacagcgagcac
gaactgctgcgctacctgcgttcgctggccgacaaggacctggcgatggaccgcacgatg
atcccgctgggctcgtgcaccatgaagctcaacgccaccgccgagatgatcccggtgacc
tggccggagttctcgcagatccacccgctggtgccggccgaccaggcgctgggctacaag
gaactgatcgacacgctggaagcgatgctggtcgaatgcaccggctacgacgcggtcagc
ctgcagccgaactccggcgcgcagggcgagtacgccggcctgctggcgatccgcgcctac
caccgttcgcgcggcgaagatcaccgtgacatctgcctgatcccggattcggcacacggc
accaacccggcttcggcacagatgtgcggcatgaaggtggtggtgaccaagaccgatgcc
aacggcaacgtcgatgtcgaggacatccgcctcaacgccgagaagtacagcgaccgcctg
gccgcgatcatgatgacctacccgtccacgcacggcgtgttcgaggaagaggtggtggag
atctgcgagatcatccacaagcacggcggccaggtgtacaccgacggcgccaacatgaac
gccctggtcggcgtggccaagccgggcaagtggggttcggacgtttcgcacctgaacctg
cacaagaccttctgcatcccgcacggcggtggcggcccgggcgttggcccgtgcgcggtc
aaggagcacctggcgccgttcctgccgggcaagctgggtgacaacggcccggtcggcatg
gtcagcgcggccagcttcggcagcgcctcgatcctgccgatcagctggatgtacatcgcg
atgatgggccgcgaaggcctgcgcaaggccacccaggtcgcacagctcaacgccaactac
atcgccaagcgcctggccccgcacttcaagaccctgtataccggccgcaacggcctggtg
gcgcacgagtgcatcctggacgtgcgcccgctggagaagaccagcggcatcggcgccgag
gacgtggccaagcgcctgatcgacttcggtttccacgcgccgaccctgagcttcccggtg
gccggcacgctgatggtcgaaccgaccgagagcgaatcgctgcacgagctggatcgcttc
atcgacgcgatgatccagatccgcgaggagatcaccgcgatcgaagacggccgcctggac
cgcgaagacaacccgctgaagaacgcgccgcacaccgccactgcggtgaccgccagcgaa
tggacccacgcctacccgcgtgaactggctgcgttcccgctggccagcctgaagcagagc
aagtactggccgccggtggcgcgcgtggacaacgtgtacggcgacaagaacgtgatgtgc
gcctgcattccggtcgatgcctacaaggatgatgaagtcgaggcttga
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