Stenotrophomonas geniculata: RKE57_16090
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Entry
RKE57_16090 CDS
T09411
Name
(GenBank) glycosyltransferase family 2 protein
KO
K12990
rhamnosyltransferase [EC:2.4.1.-]
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RKE57_16090
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sgen01005
]
RKE57_16090
Lipopolysaccharide biosynthesis proteins [BR:
sgen01005
]
O-antigen repeat unit
RKE57_16090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Glyco_tranf_2_3
Glyco_trans_2_3
Motif
Other DBs
NCBI-ProteinID:
WNF09575
LinkDB
All DBs
Position
complement(3484955..3485875)
Genome browser
AA seq
306 aa
AA seq
DB search
MSVFDTKRVCAVIVTYRPNPVLLRNVVDSVLQQVGHLVVFDNGSSAVDVAEMLGDQEGIS
VFASPINVGLGSALNRAYERAQALEFDYVLLMDQDSILAPGMVVLLGNALVELARDESVA
AVGPQFRDSRNGMLAPFVRFGFPFNFKLRGGPGQRISCDFLITSGSLIPMKALREIGAMD
ESLFIDNLDMDWCFRAKRSGHALYGICDAQMTHSIGEELLPSRAKPDGVIVHKPFRLYYI
MRNRVLLYGRAYTPWIWIAQDMPRLLLKLMGNSLFLAPRWVRLRFMLKGLWDGVRGKSGA
LPPAGR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgtcttcgacaccaaacgtgtctgcgccgtgatcgttacctacaggcccaatccc
gtcttgctgcgcaatgtggttgacagcgtgctgcagcaggtagggcatctggtagtgttc
gacaatggcagcagtgctgttgacgttgctgaaatgctgggagatcaagaggggataagc
gtttttgcttcaccaatcaatgttggtcttggcagtgccttgaatcgagcctatgagcgt
gcgcaggcgctggaattcgactatgtgctgctgatggaccaagacagcatactggcaccg
ggaatggtcgttctgctgggaaacgcactggttgaattggcccgggatgagagtgtggcg
gctgtcggtccgcagttccgggattcgcgcaatggcatgcttgctccgttcgtgcgcttt
ggattcccgttcaatttcaagctgcgcggtgggccaggtcagcgcatctcttgtgatttc
ctcattacatccggttcgctgataccaatgaaggccttgcgggagattggcgcaatggac
gaatccttgttcattgacaatctggacatggactggtgcttccgcgccaagcgcagtggc
catgccctgtatggcatttgcgatgcgcagatgacccacagcatcggcgaggaactgctg
ccttcacgtgcaaaacccgatggtgtgatcgtgcacaagcccttccggctttactacatc
atgcgcaatcgggtcctgctctatgggcgtgcctatacgccctggatttggattgcccag
gatatgccgcggttgctgctgaagctgatgggaaacagcttattcctagcccctcgctgg
gttcggttaaggttcatgctgaaagggttgtgggatggagttcgaggcaagtcgggggcg
ctacccccggcaggtcgctga
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