Stenotrophomonas geniculata: RKE57_16410
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Entry
RKE57_16410 CDS
T09411
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
sgen
Stenotrophomonas geniculata
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sgen03110
]
RKE57_16410 (clpB)
Chaperones and folding catalysts [BR:
sgen03110
]
Heat shock proteins
HSP100
RKE57_16410 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
ATPase_2
nSTAND3
TniB
AAA_7
bpMoxR
DUF815
AAA_14
IstB_IS21
AAA_18
AAA_24
NACHT
NBD_SMAX1
AAA_19
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
WNF09632
LinkDB
All DBs
Position
complement(3551512..3554097)
Genome browser
AA seq
861 aa
AA seq
DB search
MRMDKLTSRFQQALADAQSLAVGRDNSIIEPVHLFSALLDQQGGSTRPLLAQAGVNVPVL
RERLTEALDALPKVSGQAGNVSMGNDLGRLLNHTDKLAQQNGDAFIASEWFVLAALEDNG
TLGMALRAAGADKTRLQAAIDKLRGGENVQSENAEEQRQALEKYTIDLTARAESGKLDPV
IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINDEVPEGLRGKRVLSL
DMGALIAGAKFRGEFEERLKGVLNDLAKNEGQIILFIDELHTMVGAGKADGAMDAGNMLK
PALARGELHCIGATTLDEYRKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKEKYAVH
HGVEITDPAIVAAATLSNRYITDRQLPDKAIDLMDEAASRLRMEIDSKPEELDRLERRVI
QLKIQREMLKKEKDEASRQRLADLENDIDGLEREFSDLNEIWKSEKAALQGATKIKEQVE
QAKLELEAAQRRQDFAKMSEIQYGLLPQLEKQLAAAQEAEHKDFKLVQDRVTDEEIAEVV
SRWTGIPVNKMLEGERDKLLRMEEVLHNRVVGQEEAIKVVSDAVRRSRAGLSDPNRPAGS
FLFLGPTGVGKTELCKSLAEFLFDSADAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGG
YLTEAVRRRPYSLILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNL
GSHQIQDMSTDDSPEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARI
QMRGLEKRLAERGLKLMVSDAAFDLLGNVGFDPVYGARPLKRAIQAQLENPLAQKILSGA
FVNGDTIEVGNDGGHLVFARA
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgcggatggacaagctcacctcgcgtttccagcaggcgctggcagacgcacagtcgctg
gccgtgggccgtgacaacagcatcattgaaccggttcacctgttcagcgcgctgctggac
cagcagggcggcagcacgcgcccgttgctggcccaggccggggtgaacgtgccggtgctg
cgcgagcgcctgaccgaggcgctggatgcgctgcccaaggtgtccggccaggccggcaac
gtttcgatgggtaatgacctcggccgcctgctcaatcacactgacaagctggctcagcag
aatggggatgccttcattgccagcgagtggttcgtgctggccgcgctggaagacaacggc
acgctgggcatggcgctgcgcgccgccggtgccgacaagacccgcctgcaggctgccatc
gacaagctgcgtggcggcgagaacgtgcagtcggagaacgccgaggagcagcggcaggcg
ctggagaagtacaccatcgacctgaccgcgcgcgccgagagcggcaagctcgacccggtg
atcggccgtgacgaggaaatccgccgcaccatccaggtgctgcagcgccggaccaagaac
aacccggtgctgatcggcgaacccggcgtgggcaagaccgcgatcgtggaagggctggcc
cagcgcatcatcaatgacgaagtgcccgaaggcctgcgcggcaagcgtgtgctgtcgctg
gacatgggcgcgctgatcgccggcgccaagttccgcggtgaattcgaggagcgcctgaag
ggcgtgctcaacgacctggccaagaacgaaggccagatcatcctgttcatcgacgagctg
cacaccatggtcggcgccggcaaggctgatggcgcgatggatgccggcaacatgctgaag
ccggcgctggcacgcggcgagctgcactgcatcggtgcgaccacgctggacgaataccgc
aagtacatcgagaaggacgctgcgctggagcgccgcttccagaaggtgttcgtcggcgaa
cccacggtggaggacaccatcgcgatcctgcgcgggctgaaggaaaagtacgccgtgcac
cacggcgtggaaatcaccgacccggccatcgtggctgccgccacgctgtccaaccgctac
atcactgaccgccagctgccggacaaggccatcgacctgatggacgaggcggcctcgcgc
ctgcgcatggagatcgactccaagccggaggaactggaccgcctggaacgccgggtgatc
cagctgaagatccagcgcgagatgctgaagaaggaaaaggacgaagcctcgcggcagcgc
ctggccgacctggagaacgatatcgacgggctggagcgcgagttctccgacctcaatgaa
atctggaagtcggagaaggctgcgctgcagggcgccaccaagatcaaggaacaggtcgag
caggccaagctggagctggaagctgcgcagcgccgccaggatttcgccaagatgagcgaa
atccagtacggcctgttgccgcagctggagaagcagctggccgccgcgcaggaagccgag
cacaaggacttcaagctggtacaggaccgcgtgaccgatgaggagatcgccgaggtcgtt
tcgcgctggaccggcatcccggtcaacaagatgctcgaaggcgagcgcgacaagctgctg
cgcatggaagaagtgctgcacaaccgtgtggtcggccaggaagaggcgatcaaggtcgtc
tccgatgcggtacgccgctcgcgtgccggcctgtccgatccgaatcgtccggccggctcg
ttcctgttcctcggcccgaccggcgtcggcaagaccgagctgtgcaagtcgctggccgag
ttcctgttcgacagtgccgacgcgatgatccgcatcgacatgagcgagttcatggagaag
cacagcgtcgcacgcctgatcggtgcacctccgggctacgtcggctacgaggaaggcggc
tacctgaccgaagccgtgcgtcgccgcccgtattcgctgatcctgctcgacgaagtggag
aaggcacatccggatgtgttcaacatcctgctgcaggtgctggacgatggccgcctgacc
gatggccagggccgcaccgtggacttccgcaacaccgtcatcgtgatgacttcgaacctg
ggctcgcaccagatccaggacatgagcaccgacgacagcccggaggcctacacgcagatg
aaggcggcggtgatgggcgtggtgcaggcacacttccgcccggaattcatcaaccgcctg
gacgacatcgtcgtgttccacccgctggacaagcagcagatcaagcagatcgcgcgtatc
cagatgcgtgggctggagaagcgcctggccgagcgtggcttgaagctgatggtgtccgac
gcagcgttcgacctgctcggcaacgttggcttcgatccggtgtatggcgcgcgtccgttg
aagcgtgcgatccaggcacagctggaaaatccgctggcgcagaagatcctctccggtgcc
ttcgtcaacggcgacaccatcgaagtcggcaacgacggcggtcacctggtgttcgccagg
gcgtga
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