Stenotrophomonas geniculata: RKE57_16505
Help
Entry
RKE57_16505 CDS
T09411
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen00020
Citrate cycle (TCA cycle)
sgen00640
Propanoate metabolism
sgen00660
C5-Branched dibasic acid metabolism
sgen00720
Other carbon fixation pathways
sgen01100
Metabolic pathways
sgen01110
Biosynthesis of secondary metabolites
sgen01120
Microbial metabolism in diverse environments
sgen01200
Carbon metabolism
Module
sgen_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sgen_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RKE57_16505 (sucD)
00640 Propanoate metabolism
RKE57_16505 (sucD)
00660 C5-Branched dibasic acid metabolism
RKE57_16505 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
RKE57_16505 (sucD)
Enzymes [BR:
sgen01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
RKE57_16505 (sucD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
KARI_N
Motif
Other DBs
NCBI-ProteinID:
WNF09651
LinkDB
All DBs
Position
complement(3576584..3577459)
Genome browser
AA seq
291 aa
AA seq
DB search
MSVLINKNTKVIVQGFTGQQGTFHATQMIEYGTQVVGGVTPGKGGTTHIDLPVFNTVADA
VQSTGANASVIYVPPPYAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRSHPDTV
LIGPNCPGVITPGECKIGIMPGHIHQPGKIGIVSRSGTLTYEAVKQTTEVGLGQSTCIGI
GGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKNHVKKPVVGFIAGAS
APAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVVTVRSPGDLGAAIAKLVK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttttgattaacaagaacaccaaggtgatcgtgcagggcttcaccggccagcag
ggcaccttccacgccactcagatgatcgagtacggcacccaggttgttggcggcgtgacc
ccgggcaagggtggcaccacccacatcgacctgccggtcttcaacaccgttgccgacgcc
gtgcagagcaccggcgccaacgcttcggtcatctacgtgccgccgccgtacgcggccgac
gcgatcctggaagccgctgctgccggcatcaaggtcatcgtctgcatcaccgaaggcatc
ccggtgctggacatgctgcgcgtcaagaacgtgctgacccgttcgcatccggacaccgtg
ctgatcgggccgaactgcccgggcgtcatcaccccgggtgagtgcaagatcggcatcatg
ccgggccacatccaccagccgggcaagatcggcatcgtgtcgcgttcgggcaccctgacc
tatgaagcggtcaagcagaccaccgaagtcggcctgggccagtccacctgcatcggcatc
ggtggtgacccgatcaacggcctgaacttcgtcgactgcctgaagctgttcaacgaagac
ccgcagaccgaaggcatcatcatggtcggcgaaatcggcggtgacgccgaggaagccggt
gccgagtacatcaagaaccacgtgaagaagccggtcgtcggtttcatcgccggtgcgtcg
gctccggccggcaagcgcatgggccacgccggtgcgatcgcctcgggcggcaagggcacg
gccgaaggcaagttcgccgccatggaagctgctggcgtcgtcaccgtccgttcgccgggc
gacctgggcgccgccatcgccaagctggtgaaataa
DBGET
integrated database retrieval system
