Stenotrophomonas geniculata: RKE57_16520
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Entry
RKE57_16520 CDS
T09411
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RKE57_16520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sgen02022
]
RKE57_16520
02035 Bacterial motility proteins [BR:
sgen02035
]
RKE57_16520
Two-component system [BR:
sgen02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
RKE57_16520
Bacterial motility proteins [BR:
sgen02035
]
Pilus system
Twitching motility proteins
RKE57_16520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA_19
HTH_30
HTH_50
Pre_tape_measure
Motif
Other DBs
NCBI-ProteinID:
WNF09654
LinkDB
All DBs
Position
3580729..3582102
Genome browser
AA seq
457 aa
AA seq
DB search
MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPD
GNGIELVSEIAQHYPRTPVAMITAFGSMDLAVEALKAGAFDFVSKPVDISVLRGLVKHAL
ELNNTERPAPGPATEQAARLLGASPAMDVLRTTIGKVARSQAPVYILGESGVGKELVART
IHAQGARAAGPFVPVNCGAIPGELMESEFFGHRKGSFSGAHADKPGLFQAAHGGTLFLDE
VAELPLQMQVKLLRAIQEKSVRAVGAPNEEPVDVRILSATHRDLAELVEDGRFRHDLYYR
INVIELKVPPLRERRQDLPELAAAVLARLARSHGRATPLLAPSALEALAHYAFPGNVREL
ENILERALALAEEDRIGADDLRLPQHAPRAPGGAAPAEAVADLQPGGAALPSYIEQLERS
AIQRALEENRWNKTRTAAQLGITFRALRYKLKKLGME
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaacccgcagcgccctcgtcgtcgacgatgaacgcgacatccgcgaactgctg
gtactgaccctcggccgcatggggctgcgcatcagtaccgccgccaacctggccgaagca
cgcgagctgctggccagcaatccgtacgacctgtgcatcaccgacatgcgccttccggat
ggcaacggcattgagctggtcagcgaaatcgcccagcactacccgcgcacgccagtggcg
atgatcaccgcgttcggcagcatggacctggccgtggaagcgctgaaagccggcgccttc
gacttcgtcagcaagccggtggacatctcggtgctgcgtggcctggtcaagcacgcgctg
gagctcaacaacaccgaacgccctgcgcccggccccgccaccgaacaggctgcacgcctg
ctgggcgcttcgccggccatggacgtgttgcgcaccaccatcggcaaggtcgcgcgcagc
caggcgccggtctacatcctcggtgaatccggggttggcaaggaactggtcgctcgcacc
atccacgcccagggcgcgcgtgcggccggcccgttcgtgccggtcaactgcggcgccatt
cccggcgagctgatggagagcgaattctttggccaccgcaaaggcagcttcagcggcgcg
catgccgacaagcccggcctgttccaagccgcgcacggcggcaccctgttcctggacgaa
gtggccgaactgccgttgcagatgcaggtcaagctgctgcgcgcgatccaggaaaagtcg
gtgcgcgcggtcggtgcgcccaacgaagagccggtggacgtgcgcattctctcggccacg
caccgtgacctggccgaactggtcgaggacgggcgcttccgccacgacctgtactaccgc
atcaacgtgatcgaactgaaggtgccgccgctgcgcgagcgccgccaggacctgccggag
ctggcggccgccgtgctggcgcggctggcccgcagccacggccgtgccaccccgctgctg
gcgccgtcggcgctggaggcgctggcccactatgcgttcccgggcaatgtgcgcgagctg
gagaacattctggaacgcgcgctggcactggccgaagaagaccgcatcggtgccgacgac
ctgcgcctgccgcagcacgccccgcgtgcgcccggcggcgcagctcccgccgaagccgtg
gccgacctgcagccgggcggcgccgccctgccctcgtacatcgagcaactggaacgcagc
gccatccagcgcgcgctggaagagaaccgctggaacaagacccgcaccgccgcgcagctg
ggcatcaccttccgcgcgctgcgctacaagctgaagaagctgggaatggagtaa
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