Stenotrophomonas geniculata: RKE57_17410
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Entry
RKE57_17410 CDS
T09411
Name
(GenBank) efflux RND transporter permease subunit
KO
K18303
multidrug efflux pump
Organism
sgen
Stenotrophomonas geniculata
Module
sgen_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgen02000
]
RKE57_17410
01504 Antimicrobial resistance genes [BR:
sgen01504
]
RKE57_17410
Transporters [BR:
sgen02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RKE57_17410
Antimicrobial resistance genes [BR:
sgen01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
RKE57_17410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
DUF5693
Motif
Other DBs
NCBI-ProteinID:
WNF09823
LinkDB
All DBs
Position
complement(3783495..3786656)
Genome browser
AA seq
1053 aa
AA seq
DB search
MRRFNLSEWALSNRPLVLFAMLAFALIGAWSYKHLGQSEDPPFTFKAMVVRTLWPGATAE
QVSRQVTEPIEKALMNTGEYEFIRSYSRPGESQVIFMARDSLRSRQIPDLWYQVRKRVGD
IRPTLPREIVGPFFNDEFGDTYGNIYALTGKGFDYAVMRDYADRIQLELQRVPDVGKIDL
VGLQDEKVWIELSNTRLATLGVSMQQVQQALADQNAVTGTSFFETATDRVQLRVTGQFND
IEAIRQFPIRAGDRTVHLGDIAEVKRGFADPASPKMRFMGEEAIGLAVAMKDGGDILKLG
ANLDAEFERLQKTLPAGMQLRKVSDQPQSVEESVGEFVQVLTEAVVIVLLVSFFSLGLRT
GLVVGVTIPLVLAMTFFVMHYFDIGLHKISLGALVLALGLLVDDAIIAVEMMATKMEQGY
DRLRAASFAWESTAFPMLTGTLITAAGFLPIATAASSTGEYTRSLFQVVTIALVVSWIAA
VLFIPYLGDKMLPDLFNPQPPKPGSLSARWHAKRQQWADRYPALANLIAPPQHGHDHDPY
QRPFYRSFRRFLDTCLRRRWWVIAATIALFIGSLMLFRFVPQQFFPDSTRPELMVDIELA
EGASLRSTQAQAEKLEKLLSSREDIANYVSYVGTGSPRFYLPLDQQLPATNFAQFVVLAK
DIKSRESTRDWLLHEVIPKFPDVQMRVTRLENGPPVGYPVQMRISGEHIEKVQAIARQVE
AKVRENPHVMNVNLDWSEPSKVVRLVIDQERARALGVSSAQVSQFLSSSLAGQSVSVYRE
GNRQIEMLLRGPTDERNQLELLSSLSMPTANGGSITLSQVATMEYGFEDGIIWHRNRLPT
VTVRADISDGMQPLDVVHQILPTLDGIRAELPSGYLLETGGTVEDSARGQNSIKAGMPLF
LVVVATLLMLQLRSFSRAAMVLVTAPLGIIGATLFLLLFRAPFGFVALLGTIALAGMIMR
NSVILIDQIQQDIDAGHDRWHSIIDATVRRFRPIVLTALAAVLAMIPLSRSAFYGSMAIS
IMGGLIVGTVLTLVFLPALYAAWFRVKPDESGA
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
gtgcgccgcttcaatctttccgagtgggcgctgtccaaccgcccgctggtgctgttcgcg
atgctcgccttcgccctcatcggcgcatggtcgtacaagcatctgggccagtccgaagac
ccgccgttcaccttcaaggcgatggtggtgcgcacgctatggccgggcgccaccgccgag
caggtctcgcggcaggtgaccgagccgatcgagaaggcgttgatgaacaccggcgagtac
gagttcatccgctcgtactcgcgcccgggtgaatcgcaggtcatcttcatggcccgcgac
agcctgcgttccaggcagattccggacctctggtaccaggtgcgcaagcgcgtgggtgac
atccgcccgacgctgccgcgcgagatcgtcggcccgttcttcaacgatgagttcggcgat
acctacggcaacatctatgcgttgaccggcaagggcttcgactacgcggtgatgcgtgac
tacgccgatcgcatccagctggaactgcagcgcgtgcccgacgtcggcaagatcgacctg
gtcggcctgcaggacgagaaggtgtggatcgagctgtccaatacccggctggccacgctg
ggcgtgtcgatgcagcaggtgcagcaggcactggccgaccagaatgcggtgaccggcacc
agcttcttcgagaccgccaccgatcgcgtgcagctgcgcgtgaccggccagttcaacgac
atcgaagcgatccgccagttcccgatccgcgccggtgaccgcaccgtgcacctgggcgac
atcgccgaggtcaagcgtggcttcgccgatccggcgtcgccgaagatgcgcttcatgggt
gaagaggcgattgggctggcggtggcgatgaaggatggcggtgacatcctcaagctcggc
gccaacctcgatgccgagttcgaacgcctgcagaagaccctgccggccggtatgcagctg
cgcaaggtgtccgaccagccgcagtcggtggaagagtcggtcggcgagttcgtgcaggta
ctgaccgaggcggtggtgatcgtgctgctggtcagcttcttctcgctgggcctgcgcacc
ggtctggtggtgggcgtgaccatcccgctggtgctggcgatgacgttcttcgtcatgcac
tacttcgacatcggcctgcacaagatctcgctgggtgcgctggtgctggcgctgggcctg
ctggtggacgatgcgatcatcgcggtggagatgatggccaccaagatggaacagggttac
gaccgcctgcgcgcggccagttttgcctgggaatcaactgcgttcccgatgctgaccggt
acgctgatcacggcggccggcttcctgccgatcgctacagcggcatcgagcaccggtgag
tacacccgctcgctgttccaggtggtgaccatcgcgctggtggtgtcgtggatcgcggcg
gtgctgttcatcccgtacctgggcgacaagatgctgccggacctgttcaatccgcagccg
ccgaagccgggcagcctgtccgcgcgctggcatgccaagcgccagcagtgggccgaccgc
tacccggcgctggccaacctgatcgcgccgccgcagcacgggcatgaccatgatccgtac
cagcgcccgttctatcgcagcttccgtcgcttcctggatacctgcctgcgccggcgctgg
tgggtgatcgccgcgaccatcgcgttgttcatcggttcgctgatgctgttccgcttcgtg
ccgcagcagttcttcccggattcgacccggccggagctgatggtggacatcgagctggcc
gagggcgcctcgctgcgctcgacccaggcccaggccgagaagctggagaaactgctgtcc
agccgcgaggacatcgccaactatgtgtcctacgtgggcaccggttcgccgcgcttctac
ctgccgctggaccagcagctgccagccaccaacttcgcccagttcgtggtgctggccaag
gacatcaaatcgcgcgaaagcacccgcgactggctgctgcatgaggtgatcccgaagttc
ccggacgtgcagatgcgcgtgacccgcctggagaacggcccaccggtcggctacccggtg
cagatgcgtatttccggcgagcacatcgagaaggtgcaggcgatcgcacgccaggtcgag
gccaaggtgcgcgagaacccgcacgtgatgaacgtcaacctggactggagtgagccgagc
aaggtggtgcggctggtgatcgaccaggagcgtgcccgcgcgctgggcgtaagcagtgca
caggtgagccagttcctgtccagttcgctggccgggcagtcggtgagcgtgtaccgcgaa
ggcaaccgccagatcgagatgctgctgcgcgggccgaccgatgagcgcaaccagctggag
ctgctgtcgagcctgtcgatgccgactgccaacggcggcagcatcacgctgtcacaggtg
gcgacgatggagtatggctttgaggacggcatcatctggcaccgcaaccggttgccgacg
gtgaccgtgcgtgccgacatcagcgacggcatgcagccgctggacgtagtgcaccagatc
ctgccgacgctggacgggatccgcgctgaactgcccagtggctacctgctggagaccggc
ggtacggtggaggattcggcccgtggccagaactcgatcaaggccggcatgccgctgttc
ctggtggtggtcgccacgctgctgatgctgcagctgcgcagcttctcgcgtgcggcgatg
gtgctggtaaccgcgccgctgggcatcatcggtgcgaccctgttcctgctgctgttccgt
gcgccgttcggcttcgtggcgctgctgggcacgattgcactggccggcatgatcatgcgc
aactcggtgatcctgatcgaccagatccagcaggacatcgatgccgggcatgaccgctgg
cattcgatcatcgatgccacggtgcgccgtttccgcccgatcgtgctgaccgcgctggcg
gcggtgctggcgatgattccgctgtcgcgcagtgcgttctatggctcgatggcgatttcg
atcatgggtggcctgattgtaggcaccgtgctgaccctggtgttcctgccggcgctgtac
gcggcgtggttccgggtgaagccggacgaatccggggcataa
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