Stenotrophomonas geniculata: RKE57_17800
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Entry
RKE57_17800 CDS
T09411
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
sgen
Stenotrophomonas geniculata
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sgen01011
]
RKE57_17800
Enzymes [BR:
sgen01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RKE57_17800
Peptidoglycan biosynthesis and degradation proteins [BR:
sgen01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RKE57_17800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
TPR_16
Motif
Other DBs
NCBI-ProteinID:
WNF09898
LinkDB
All DBs
Position
3876720..3878705
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AA seq
661 aa
AA seq
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MLVAMTRRTSTALSLLPLATTLLIGCANAQSLDAQNAQLKAAIAAAERGQFDPGQAAALS
RHPAYGWLEYANLRRNIDTVDTAQAQAFLKRYDGQAVANTFRSVWLPSVARRQDWPTLLA
NWVPTDNAGLRCAQLTARQVTGKVDPQWISEAQDLWRKNGKSLPDGCDAVFAVLQAQGGL
SDALRWERIDAAADAQQPAVMRSAARGLPATELTLANTYAAFVDRPNASALNWPRNERSR
RIATDGLAKLAKADPAATEQQLPQYAQALGLSAEQQGQVLYQIALWTVASYLPDSARRLN
AVPESAYDERLHEWRVREAMSRGDWPAALTAIRKMASKQRSDPRWRYFEGRMLEKTGQAQ
QAQPLFRDAARAPTFHGFLAADKLQQGYTLCPWKPNDSAQAQAVVARDPAIQRAMALYQI
DRAGWAVAEWNSALSRFDDTQRRLAVRVAQDNGWFDRAVFALGKQPQEQRLYDLRFPLHH
DATIRRESARNAIDPAWVAAEIRAESTFTPRARSPANAMGLMQVLPATGAGVAKSIGLTG
YGGADSLYDPDTNIAIGTAYLRQLMNKYDGLPYVTIAAYNAGPTPTARWQGQRPGFDPDL
WIETISYKETREYVARVLAFSVIYDWRLNGDALPLSDRLMGRLVDKRKSFICAANAEQGG
D
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcgccatgacccgacgcacttcaactgccctgtccctgctgcccttggccacc
acgctgctgatcggctgcgccaacgcccagtccctcgacgcccagaacgcgcagctgaag
gctgcgatcgctgccgccgaacgcggccagttcgatcccggccaggccgctgcactcagc
cgccatccggcttacggatggctggagtacgccaacctgcgccgcaacatcgacaccgtc
gataccgcgcaggcacaggccttcctcaagcgctatgacggccaggccgtggccaacacg
ttccgcagcgtgtggctgccctcggtcgcacgccgccaggactggcccaccctgctcgcc
aactgggtgcccaccgacaacgccggcctgcgctgtgcgcagctgaccgcgcgccaggtg
accggcaaggtcgatccgcagtggatcagtgaagcgcaggatctgtggcgcaagaacggc
aagtcgctgccggacggctgtgatgccgttttcgccgtgctgcaggcgcaaggtggcctg
agcgacgccctgcgctgggaacgcatcgatgccgccgccgacgcccagcagccggccgtg
atgcgcagcgctgcacgtggcctgcctgccaccgagttgacgctggcgaacacctacgcc
gcctttgtcgacaggcccaatgccagcgccctgaactggccgcgcaacgagcgcagccgg
cgcatcgccaccgatggcctggccaagctggccaaggccgacccggccgccaccgaacag
cagctgccgcagtatgcccaggcgctgggcctgagtgccgagcagcagggccaggtgctg
taccagatcgcactgtggacggtggcgtcctatcttcccgattcggcgcgccgcctcaac
gcggtgccggaatcggcgtatgacgaacgcctgcacgaatggcgcgtgcgcgaagcgatg
tcgcgcggtgactggccggcggcgctgaccgcgatccgcaagatggccagcaagcagcgc
agcgacccgcgctggcgctacttcgaaggccgcatgctggagaagaccgggcaggcccaa
caggcgcagccgttgttccgcgatgcggcgcgtgcccccaccttccacggtttcctggcc
gccgacaagctgcagcagggctacaccctgtgcccgtggaagccgaatgacagcgcgcag
gcacaggcagtggtcgcgcgcgatccggccatccagcgcgcgatggcgctgtaccagatc
gaccgcgccggctgggccgtggccgaatggaacagcgcgctgtcgcgcttcgatgacacc
cagcgccgcctggcggtacgcgttgcgcaggacaacggctggttcgaccgcgccgtgttc
gcgctcggcaaacagccgcaggaacagcgcctgtacgacctgcgtttcccgctgcaccac
gacgccaccatccgccgcgagtcggcacgcaatgccatcgacccggcctgggtggctgcg
gagatccgagccgaaagcaccttcactccgcgtgcgcgctcgcctgccaacgccatgggc
ctgatgcaggtgctgccggccaccggtgccggtgtggccaagtcgatcggcctgaccggc
tacggcggcgccgacagcctgtacgacccggacaccaacatcgccatcggcaccgcctac
ctgcgccagctgatgaacaagtacgacggcctgccgtacgtgaccatcgccgcctacaac
gccggcccgaccccgaccgcacgatggcagggccagcgcccgggctttgatccggacctg
tggatcgagaccatcagctacaaggaaacccgcgagtacgtggcccgcgtgctggccttc
agcgtgatctacgactggcgcctcaatggcgatgcgctgccgctgagcgaccgcctgatg
ggccgcctggtggacaagcgcaagagcttcatctgcgccgccaacgccgagcagggcggc
gattga
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