Stenotrophomonas geniculata: RKE57_17835
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Entry
RKE57_17835 CDS
T09411
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
sgen
Stenotrophomonas geniculata
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
AC_1
Motif
Other DBs
NCBI-ProteinID:
WNF09905
LinkDB
All DBs
Position
complement(3883421..3886447)
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AA seq
1008 aa
AA seq
DB search
MSRAVPRAFRPRRLTVSVLQALAVPSVMLLSASVAWAGCDSAAPVAGHTVTCDANAPNPQ
TVPITANGAAGITINIANTAQLQQSGGSSAISLVGAGGHLLSNLGTISSVGSVAVQLGGG
SRVENAGSISTGNNTALQFVGAGDSVLVNRGTISGRTAVQFGAGNDRLEMQAGSISGGVQ
QGDGNDVLLLSDGTIDSVDQGSGDDQMTVTGGTVTGLVAQGSGRDDFVMSGGTVGALQQG
DNIDTFRMSGGRIIGAFEDGDQAWMTGGRIGRVNMKLDKNLWDQSGGTVDGNVVTGFDTD
TIIISGTAYIGGNISVSGGNDSVTITDGTVRGQVLLSNGNDTFNWNGGGIVYGAIDMGPD
NDVANLSNLNQGNLGAVPLFDGGGGIDQLNLSNVKTTGVGRFQYWEAISLANSTELSFDG
DLVLGDSGSGTGTLTVDDTSTVYAGSGGHAIRPFNSGALVEMVNAGRIDLTGTGAGDVFT
VRGNYRGDGGGLYLRTVLGADNSTSDRLVIDGGTATGTTGIGVLNAGGSGAATLADGILV
VQALNGGRTAPGAFSLFAPVAAGAYEYYLFKGGVSAGTAENWYLRSTLVTGPTPAPNGGG
SATPPPLTPPVAPPPPITPAPPPPPEGATDPDLTAGETAPPPPPPEPAPVAPPSDPAVPD
VPVAGGALPGTGAPPTPGARPAEGAVVPLYRVETATYAVVPPLLRETSLASLGTFHERQG
EQRLLYNQGAFRTAWGRLVGQSSEIHWKGDAQPGFDGDVMGLQAGLDVWAAASDNHRNQI
GVFVGRTRAQGKTTGLALGWENVQVGQNRLDDKHVGLYWTLTDSSGGYIDAVAMQSRYDG
RVRSSRGLGFGISGDGTSVSVEAGKPLLHVGQSAWWLEPQLQVIWQRTSLDDRRDEVSSV
RFDNDNAWTGRIGLRLAGDYQLADNGWQPYFKLNYWHGRSGEDRIRFDDDTIISSQRSRA
LEAGVGVVGRFNRTISAYAVADYTRDLGGDRNEKRRIIEGNIGLRADW
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtgccgttccgcgcgctttccgtccgcgccgcctcaccgtttccgtgctgcag
gccctggctgtcccgtccgtcatgctgctgagtgccagcgtcgcctgggccggctgcgac
agcgccgcccccgtcgccggccatacggtcacctgcgatgccaatgcgccgaacccgcag
actgttcccatcacggccaatggcgcggccggcatcaccatcaatatcgccaacacggca
caactgcagcagagcggtggcagcagcgcgatttcgcttgttggtgccggtgggcatctg
ttgtccaacctgggcacgatcagttcggtgggcagtgtggcggtccagctcggtggcggc
agccgtgtcgaaaatgcgggcagcatcagcaccggcaacaacaccgccctgcagttcgtc
ggtgcgggcgacagcgtgctggtcaaccgcggaacgatcagcggccgcacggctgtgcag
ttcggtgcgggcaacgaccgcctggagatgcaggcaggcagcatctccggtggcgtccag
cagggcgatggcaatgatgtgctgctgttgagcgatggcacgatcgacagcgtcgaccag
ggcagtggcgatgaccagatgaccgtcaccggcggcaccgtcaccggcctggtagcgcag
ggcagcggccgcgatgatttcgtcatgagtggcggcacggtcggcgcgctgcagcagggc
gacaacatcgataccttccgcatgagcggtggccgcatcatcggcgcgttcgaggatggc
gaccaggcctggatgaccggtggccgcatcggccgcgtcaacatgaagctggacaagaac
ctgtgggaccagtccggcggcaccgtggatggcaatgtggtgaccggtttcgacaccgat
accatcatcatctcgggtaccgcctacatcggcggcaacatcagcgtcagcggcggcaac
gacagcgtgaccatcaccgacggcaccgtgcgcgggcaggtactgctcagtaacggcaat
gacaccttcaactggaatggcggtggcatcgtctacggcgcgatcgacatgggcccggac
aacgacgtggccaacctcagcaacctcaaccagggcaacctcggtgcggtgccgctgttc
gacggtggcggtggcatcgaccagctcaacctgagcaacgtcaagaccacgggcgtgggc
cgcttccagtactgggaggcgatcagcctggccaacagcaccgagctgagcttcgatggc
gatctggtgctgggcgacagcggtagcggcaccggcacgctcacggtggatgacaccagt
accgtctacgcgggcagtggggggcatgccatccgcccattcaacagtggtgcactggtg
gagatggtcaatgccgggcgcatcgacctgaccggtaccggcgctggcgacgtgttcacc
gtgcgtggcaactaccgcggagacggtggtggcctgtacctgcgtaccgtgctgggcgcg
gacaactccaccagcgaccgtctggtgatcgacggcggtactgccaccggcaccaccggc
atcggcgtgctcaatgccggcggcagcggcgccgccacgctggccgatggcatcctggtg
gtgcaggccttgaatggcggccgcaccgcgccgggtgcgttttcgctgttcgcaccggtt
gcggccggtgcctacgagtactacctgttcaagggcggtgtcagtgccggtaccgccgag
aactggtacctgcgttcgacgctggtgaccgggccgacgccagcacccaatggtggcggc
agcgcgacaccgccaccgctgacgcctccagtggccccaccgccgccgatcaccccggca
ccgccgccgccgcccgaaggcgccaccgatccggacctgaccgcgggcgagaccgcgccg
ccaccaccgccaccggaacccgcgccggtggcgccacccagcgatccggccgtgccggac
gtgccagtggccggcggtgcgctgcccggaaccggtgccccgccgacgccgggtgcacgc
cccgccgagggcgcagtggtgccgctgtaccgcgtggagactgccacctatgccgtggtg
ccgccgctcctgcgcgagacctcgctggccagcctcggcaccttccacgagcggcagggc
gagcagcgcctgctgtacaaccagggcgcattccgcaccgcctggggccgcttggtgggt
cagagcagcgagatccattggaagggtgatgcgcagccgggcttcgatggcgatgtgatg
ggcctgcaggccggtctcgacgtatgggccgctgcctccgacaaccaccgcaaccagatc
ggcgtgttcgtcggccgcacccgcgcgcagggcaagaccaccggcctggcattgggctgg
gagaacgtgcaggtgggccagaaccgcctggacgacaagcacgtgggcctgtactggacg
ctcaccgacagcagtggtggctatatcgacgccgtagcgatgcagagccgctacgacggc
cgcgtgcgttcctcgcgtgggctcggcttcggaatcagcggcgatggcaccagcgtgtcg
gtggaggccggcaaaccgctgctgcacgtcggtcagtccgcatggtggctggaaccgcag
ctacaggtgatctggcaacgcacgtcgctggacgaccgccgcgatgaggtgtcgagcgtg
cgtttcgacaacgacaacgcctggaccggccgcatcggcctgcgcctggccggcgattac
cagctggccgacaacggctggcagccgtatttcaagctcaattactggcatggccgctcc
ggcgaggaccgcatccgcttcgacgacgacacgatcatcagttcgcagcgctcgcgtgca
ctcgaagccggtgtgggcgtggtagggcgcttcaatcgcaccatcagcgcgtacgcggtg
gccgactacacgcgcgatctgggcggtgaccgcaacgagaagcgccgcatcatcgaaggc
aacatcggcctgcgcgcggactggtag
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