Stenotrophomonas geniculata: RKE57_17965
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Entry
RKE57_17965 CDS
T09411
Name
(GenBank) lipid A deacylase LpxR family protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen00540
Lipopolysaccharide biosynthesis
sgen01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RKE57_17965
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sgen01005
]
RKE57_17965
Lipopolysaccharide biosynthesis proteins [BR:
sgen01005
]
Lipid A
RKE57_17965
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
WNF09931
LinkDB
All DBs
Position
3916710..3917783
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AA seq
357 aa
AA seq
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MSPPSQRRLAALGLSGLLAAALPLAAQAAEQCGPDAMRDHPPQVNFRVDNDLFGGRHQDQ
GYTNGALLTLVSPNLVDYTDDPCLPRMARWVNQYLEGLHPGKFEQQNMIFSIGQGIFTPT
DFSRRDLIEDDRPYAGVLIANFGFNARSGDRLQTTQLTLGVVGPWAQGKQVQNAVHDVLG
DEKFKGWDNQLHNEPLFMLTHERMRRWPGDASVNADGWGWDAISHYGGSIGNLETKANLG
GEVRFGWKLPDDFGSTPLRPAGENTAPTRGGRPNGWSWHLFATSDAAWVIRDITLDGNTF
RNSHSVDKRHVVAYGGYGVAVMYGRWKFAAARYHSTREFNGQREAPVFGSFTISRSL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgagccccccttcccaacgccgccttgcagccctcgggctgtcaggcctgctggctgct
gccctcccccttgccgcccaggcggccgaacaatgtggtccggacgcaatgcgcgaccac
ccgccgcaggtcaatttccgcgtcgacaatgacctgttcggcggccgccaccaggaccag
ggctacaccaacggtgcactgttgaccctggtctcgcccaatctggtcgattacaccgac
gacccctgcctgccgcgcatggcgcgctgggtgaaccagtacctggaagggctgcacccg
ggcaagttcgaacagcagaacatgatcttcagcatcggccagggcatcttcaccccgacc
gatttcagccgcagggacctgatcgaggacgaccgcccttacgccggcgtactgatcgca
aacttcggtttcaatgcgcgcagcggcgaccgcctgcagaccacccagctgacgctgggc
gtggttggcccgtgggcacagggcaagcaggtgcagaacgccgtgcacgacgtgctgggc
gacgagaaattcaagggctgggacaaccagctgcacaacgagccgctgttcatgctgacc
cacgagcgcatgcgccgctggccgggcgatgccagcgtcaatgccgacggctggggttgg
gacgccatcagccactacggtggatcgatcggcaacctggaaaccaaggccaacctcggc
ggtgaagtgcgcttcggctggaagctgccggacgacttcggcagcacgccgttgcgcccg
gccggcgagaacacggcgccgacgcgcggtggccgtcccaatggctggtcctggcacctg
ttcgcgacctcggacgctgcctgggtgatccgcgacatcacgctggacggcaacacgttc
cgcaacagtcacagcgtggacaagcgccatgtggtggcttacggcggctacggcgtggcc
gtgatgtacggacgctggaagttcgctgcggcgcgttaccacagcacgcgcgagttcaac
ggccagcgcgaagcaccggtgttcggcagcttcaccatcagccggtcgctgtag
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