Stenotrophomonas geniculata: RKE57_17975
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Entry
RKE57_17975 CDS
T09411
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
sgen
Stenotrophomonas geniculata
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sgen01011
]
RKE57_17975
Enzymes [BR:
sgen01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RKE57_17975
Peptidoglycan biosynthesis and degradation proteins [BR:
sgen01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RKE57_17975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
FtsK_4TM
Motif
Other DBs
NCBI-ProteinID:
WNF09933
LinkDB
All DBs
Position
complement(3919224..3920501)
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AA seq
425 aa
AA seq
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MNIRWLVPGLIVLALAACSSAPKKPATAGHGGKSGGTLVQGRGSRPAHCPEGSPYAAAKE
DPNTRGNYTAGGLYKPGVRDSTPDYIPNVACIPEPEVTAEERSAIGNKSPYVVLGKSYKV
LDDTRNYVERGTASYYGAKFHGRLTSNREVYDMYQFTAAHKTLPLPSFARVTNLDNGESV
IVRVNDRGPFHDGRVVDLSYAAAVRLGITQRGTGNVEVRALQPGESNLLAQKPSRRERRA
AETAATTAVASARPTPAARATADSDIDRLVKRLPGDSMPARGQPATTQGVASTVPDVAVS
SLPPSAPPVRSTVPAPAVVASTTPRAVAPAPVRSASTTPAAPSLSQQVVGAVMVQVASFS
SRDNANRAMGQLNAAGIVGATISDIAAGGRTLFRLRVPASDHASAAELAGRIAGLGLGSP
QIVKD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcagatggctggtcccaggcttgatcgttctcgcgctggctgcctgcagcagc
gcgccgaagaagccggccacggccggccatggtggcaagtcgggcggcaccctggtgcag
gggcgcggctcgcgcccggcacactgcccggaaggctcgccctatgctgcggccaaggaa
gacccgaacacgcgcggcaactacaccgccggcgggctgtacaagccaggcgtgcgtgac
agcaccccggactacattcccaacgtcgcctgcattcccgagccggaagtgaccgccgaa
gagcgttcggccatcggcaacaagtcgccgtacgtggtgctgggcaagtcgtacaaggtg
ctcgacgacacccgcaactatgtcgagcgcggtacggcctcgtactacggcgccaagttc
cacggccgcctgacctccaaccgcgaggtctacgacatgtaccagttcaccgccgcgcac
aagacgctgccgctgcccagcttcgcccgcgtcaccaacctggacaacggcgagtcggtg
atcgtgcgcgtcaacgatcgcggcccgttccatgatggccgcgtggtcgacctcagttat
gccgccgcggtgcggctgggcatcacccagcgcggtaccggcaacgtggaagtgcgtgcg
ctgcaaccgggcgagagcaacctgctggcccaaaagccgtcgcgccgcgagcgccgtgcc
gccgaaacggccgcaaccaccgccgtggccagcgcgcgcccgacgccggctgcacgcgcc
acagccgacagcgacatcgatcgcctggtcaagcgcctgccgggcgacagcatgcctgcg
cgtggccagccggccaccacccagggcgtggccagcaccgtgccggatgtggcggtcagc
agcctgccgccgagcgcgccgccggtgcgcagcacggtgcccgctccggctgtcgtggcc
agcaccactccgcgcgcggtggcaccggcaccggtgcgcagtgcatcgaccacgccggcc
gcacccagcctgtcgcagcaggtggtgggcgcggtgatggtgcaggtcgccagcttctcc
agccgcgacaatgccaaccgcgcgatgggccagctcaacgccgccggcatcgtcggcgcg
accatcagtgacatcgctgccggtggccgcaccctgttccgcctgcgcgttcccgccagc
gaccatgccagtgctgcggaacttgccggccgcatcgccggtctgggcctgggttcgccg
cagatcgtcaaggattga
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