Stenotrophomonas geniculata: RKE57_18805
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Entry
RKE57_18805 CDS
T09411
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RKE57_18805 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgen03019
]
RKE57_18805 (groL)
03110 Chaperones and folding catalysts [BR:
sgen03110
]
RKE57_18805 (groL)
03029 Mitochondrial biogenesis [BR:
sgen03029
]
RKE57_18805 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgen04147
]
RKE57_18805 (groL)
Enzymes [BR:
sgen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RKE57_18805 (groL)
Messenger RNA biogenesis [BR:
sgen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RKE57_18805 (groL)
Chaperones and folding catalysts [BR:
sgen03110
]
Heat shock proteins
HSP60 / Chaperonin
RKE57_18805 (groL)
Mitochondrial biogenesis [BR:
sgen03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RKE57_18805 (groL)
Exosome [BR:
sgen04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RKE57_18805 (groL)
Exosomal proteins of other body fluids (saliva and urine)
RKE57_18805 (groL)
Exosomal proteins of breast cancer cells
RKE57_18805 (groL)
Exosomal proteins of colorectal cancer cells
RKE57_18805 (groL)
Exosomal proteins of bladder cancer cells
RKE57_18805 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WNF10090
LinkDB
All DBs
Position
complement(4095773..4097422)
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKDIRFGEDARSRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEI
ELADKFENMGAQMVKEVASRTNDDAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGI
DKAVVAAVAELKTISKPTADDKAIAQVGTISANSDESIGQIIADAMKEVGKEGVITVEEG
SGLDNELDVVKGMQFDRGYLSPYFINNQQSQTADLDDPFILLHDKKISNVRDLLPVLEGV
AKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVVAVKAPGFGDRRKAMLEDMAVLTGGTV
ISEEVGLSLEKATIKDLGRAKKVQVSKENTTIIDGVGDKAAVDARVGQIKTQIQDTSSDY
DREKLQERVAKLAGGVAVIKVGASTEIEMKEKKDRVDDALHATRAAVEEGVVPGGGVALV
RAVTALAGLKGANEDQNHGIQIALRAMEAPLREIVANAGEEPSVIINKVKEGTGSFGYNA
ATGEFGDMLQFGILDPTKVTRSALQNAASIAGLMITTEAMVAEAPKKDEPAMGGAGGMGG
MGGMGGMDF
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggatattcgtttcggtgaagacgcccgttcgcgcatggtgcgcggcgtc
aacgttctcgccaatgccgtcaaggccaccctgggcccgaagggccgcaacgtcgtgctg
gaaaagagcttcggcgcgccgaccatcaccaaggacggcgtctccgtcgccaaggaaatc
gaactggctgacaagttcgagaacatgggcgcgcagatggtgaaggaagttgcttcgcgc
accaacgacgacgccggcgacggcaccaccaccgccaccgtgctggcccaggccctgatc
cgcgaaggtgccaaggctgttgccgccggcatgaacccgatggacctcaagcgcggtatc
gacaaggccgtcgtggccgccgttgccgagctgaagaccatctccaagccgaccgccgac
gacaaggcgattgcccaggtcggcaccatctcggccaactcggacgagtcgatcggccag
atcatcgctgacgcgatgaaggaagtcggcaaggaaggcgtgatcaccgttgaagaaggg
tcgggcctggacaacgagctggacgtggtcaagggcatgcagttcgaccgcggctacctg
tccccgtacttcatcaacaaccagcagtcgcagactgctgacctggatgacccgttcatc
ctgctgcacgacaagaagatctccaacgtccgtgacctgctgccggtgctggaaggcgtc
gccaaggccggcaagccgctgctgatcgttgccgaagaagtcgaaggcgaagcgctggcg
accctggtggtcaacaccatccgtggcatcgtcaaggtcgtggccgtcaaggctccgggc
ttcggcgaccgtcgcaaggcgatgctggaagacatggccgtgcttaccggcggcaccgtg
atctccgaagaagttggcctgtcgctggaaaaggccaccatcaaggacctgggccgcgcc
aagaaggtgcaggtctccaaggaaaacaccaccatcatcgatggcgtgggtgacaaggct
gccgtcgacgcacgcgtcggccagatcaagacccagatccaggacacctcctccgattac
gatcgcgagaagctgcaggaacgcgtggccaagctggccggcggcgttgccgtgatcaag
gtcggtgcttcgaccgaaatcgaaatgaaggaaaagaaggatcgcgtcgacgacgccctg
cacgctacccgtgcagccgttgaagaaggcgtggtcccgggcggcggtgttgccctggtc
cgtgcggtcaccgcactggccggcctgaagggtgccaacgaagaccagaaccacggcatc
cagatcgccctgcgtgcgatggaagccccgctgcgcgaaatcgttgccaacgccggtgaa
gaaccgtcggtcatcatcaacaaggtcaaggaaggcaccggcagcttcggctacaacgcc
gccaccggcgagttcggcgacatgctgcagttcggcatcctggacccgaccaaggtgacc
cgttcggccctgcagaacgccgcgtcgatcgctggcctgatgatcaccaccgaagccatg
gttgccgaagctccgaagaaggacgagccggccatgggtggcgccggtggcatgggcggc
atgggtggcatgggcggcatggacttctaa
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