Stenotrophomonas geniculata: RKE57_19035
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Entry
RKE57_19035 CDS
T09411
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RKE57_19035 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgen03400
]
RKE57_19035 (ung)
Enzymes [BR:
sgen01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RKE57_19035 (ung)
DNA repair and recombination proteins [BR:
sgen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RKE57_19035 (ung)
Prokaryotic type
RKE57_19035 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WNF10133
LinkDB
All DBs
Position
complement(4142242..4142955)
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AA seq
237 aa
AA seq
DB search
MMDEVAGTPTIQLEPSWKQHVGDYLLQPQMRELSSFLRQRKAAGAAVFPPGPQIFAAFDA
TPFEQVKVVILGQDPYHGRGQAHGLSFSVQPGVPVPPSLLNIYKEIESDLGIPRPDHGCL
IPWAQRGVLLLNAVLTVEEGQAGAHQGRGWEGFTDHVVDVLNRERDGLVFMLWGAYAQKK
GKVIDTRRHRVLKSPHPSPLSAHRGFLGCRHFSMANEYLQRRGQAPIDWSLPPRSAL
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgaagtagccggcaccccgacgatccagctggaaccgagttggaagcagcat
gtcggcgattacctgctgcagccgcagatgcgcgagctttccagcttcctgcgccagcgc
aaggccgctggtgcggcagtgttcccgcctggcccgcagatctttgctgcgttcgacgcc
acgccgttcgagcaggtaaaggtggtcatcctcggtcaggacccgtaccacggccgaggc
caggcccatggcctgagcttctcggtgcagccgggcgtaccggtgccgccgtcgctgctg
aacatctacaaggagatcgagagcgatctgggtatcccgcgtccggaccacggctgcctg
attccgtgggcgcagcgcggcgtgctgttgctcaacgccgtgttgacggtggaagagggc
caggccggtgcccaccaggggcgaggctgggaaggcttcaccgaccacgtggtggatgtg
ctcaaccgcgaacgcgacggtctggtgttcatgctctggggcgcgtacgcgcagaagaag
ggcaaggtcatcgatacccgtcgccatcgcgtgctgaagtcgccgcacccgtcgccgtta
tcggcccaccgtggattcctggggtgccgccatttctcgatggccaacgagtacctgcag
cgccgcggccaggctccgatcgactggtcgctgccgccccgttcggcgctctga
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integrated database retrieval system
