Stenotrophomonas geniculata: RKE57_20675
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Entry
RKE57_20675 CDS
T09411
Name
(GenBank) NAD-dependent epimerase/dehydratase family protein
KO
K08679
UDP-glucuronate 4-epimerase [EC:
5.1.3.6
]
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen00053
Ascorbate and aldarate metabolism
sgen00520
Amino sugar and nucleotide sugar metabolism
sgen01100
Metabolic pathways
sgen01240
Biosynthesis of cofactors
sgen01250
Biosynthesis of nucleotide sugars
Module
sgen_M00999
UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
RKE57_20675
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
RKE57_20675
Enzymes [BR:
sgen01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.6 UDP-glucuronate 4-epimerase
RKE57_20675
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
adh_short
KR
adh_short_C2
Motif
Other DBs
NCBI-ProteinID:
WNF10442
LinkDB
All DBs
Position
complement(4499423..4500388)
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AA seq
321 aa
AA seq
DB search
MTILLTGAAGFIGAYTARALLEAGQPVVGLDNFNDYYDPQIKRDRVAALCPALDLRTLDL
TDQQGLAALFDEVKPTAVIHLAAQAGVRYSLENPHAYVDSNLVGFVNMLELCRHRGVQHL
VYASSSSVYGDSATPPFSEDQRVDQPRSLYAATKAANELMAYTYAQLYGLHATGLRFFTV
YGPWGRPDMAPLLFSRAVLAGRPIDVFNEGRMQRDFTHVSDIVSGILGALAHPADGPVPH
RVFNLGNHTPVELERFISVIEQAAGRPAQKVYKPMQPGDMVRTMADTRRAHDAFGFDAVT
PIEEGLPPVVQWCREYFGDRA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcctgctcaccggcgctgccggcttcatcggtgcctacaccgcccgcgcgctg
ctggaggcgggccagccggtggtcggcctggacaacttcaacgactactacgacccgcag
atcaagcgcgaccgcgtggcagcgctgtgcccggcgctggacctgcgcaccctggacctg
accgaccagcagggcttggcggcactgttcgacgaagtgaagccgaccgcggtgatccat
ctggccgcgcaggccggcgtgcgctattcgctggaaaacccgcatgcctacgtcgacagc
aacctggtcggcttcgtcaacatgctcgagctgtgtcgccaccgtggcgtgcaacacctg
gtctatgcctccagcagttcggtctacggcgattcagccacgccgccgttctccgaggac
cagcgcgtggaccagccgcgctcgctgtacgcggcgaccaaggcggccaacgagctgatg
gcctacacctacgcgcagctttacggcctgcatgccaccggcctgcgcttcttcaccgtg
tatggcccgtggggccggccggacatggcgccgctgctgttctcgcgcgcggtgctggcg
gggcggccgatcgacgtgttcaacgaaggccgcatgcagcgcgatttcacacatgtctcc
gacatcgtgtcgggtattctcggcgcgctcgcgcatccggccgatggtccggtaccgcac
cgggtgttcaacctcggcaaccatacgccggtcgagctggagcgcttcatcagcgtgatc
gagcaggcggccggccgccccgcgcagaaggtctacaagcccatgcagcccggcgacatg
gtacgcacgatggccgacacccggcgcgcccatgacgcattcggcttcgatgcggtgacc
ccgatcgaagaagggttgccccccgtcgtgcagtggtgccgcgagtactttggtgatcgc
gcctga
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