Stenotrophomonas geniculata: RKE57_21175
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Entry
RKE57_21175 CDS
T09411
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RKE57_21175 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgen03400
]
RKE57_21175 (recF)
DNA repair and recombination proteins [BR:
sgen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RKE57_21175 (recF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_27
AAA_29
AAA_16
ABC_tran
Glyco_hydro_39
AAA_22
AAA_25
Zeta_toxin
AAA_18
Motif
Other DBs
NCBI-ProteinID:
WNF10527
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All DBs
Position
4621818..4622912
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AA seq
364 aa
AA seq
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MQIRRLALHQLRRFSAVDLSPQPGLNLLTGDNGAGKTSVLEALHLMAYGRSFRGRVRDGL
VRQGQEALEIFVEWDEQRANHPPHRRKAGLRHSGQDWKGRLDGEDVAQLGNLCAALAVVT
FEPGSHALVSGGGEPRRRFLDWGLFHVEPDFLSLWRRYSRALKQRNALLKQGGPSRMLDT
WDHELAEAGEPLTSRRQHYLERLQQRTVALAASLAPQLGIHGLDLSPGWRRHELPLADAL
LLARERDRQAGYTSVGPHRADWSVDFHSIPGRDALSRGQAKLTALACLLAQAEDYAEQRG
EWPVIALDDLASELDRTHQARVLERLLNGPAQIFITATETPAALQELTHIARFHVEHAQI
VAVP
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcagatccgccgcctcgccttgcatcaactgcgtcgcttcagtgcggtggacctgtcg
ccccagccgggattgaacctgctgaccggcgacaacggtgccggcaagaccagcgtgctc
gaagccctgcacctgatggcctatgggcgcagcttccgtggtcgagtgcgcgacggtctg
gtgcgtcagggccaggaagcgctggaaatcttcgtggaatgggacgaacagcgtgccaat
cacccgccgcaccgccgaaaagccgggctgcgccacagtggccaggattggaaggggcga
ttggacggcgaagatgtcgcgcagctgggtaatctctgcgcagcactggccgtggtgacg
ttcgagcccgggagccatgcactggtcagtggtggtggcgaaccccgccgccgcttcctc
gattggggcttgttccacgtggaaccggattttctgtccttgtggcgccgctactcccgg
gcgctgaagcagcgcaacgccctgctcaagcagggcgggccgtcgcggatgctcgatacc
tgggatcacgagctggccgaggccggagaaccgctgaccagccgccgccagcactacctg
gagcgtctgcagcagcgcactgtggctttggccgccagcctggcgccgcaactgggcatc
cacggactggacctgagtcctggatggcggcggcatgagctccccttggccgatgccttg
cttctggcccgggaacgtgaccggcaggccgggtatacctcggtcggcccgcaccgggcg
gactggagtgtggatttccacagcattccggggcgtgatgcactgtcccgcggccaggcc
aagctgacggcattggcgtgcctgctggcacaggccgaggactatgcggaacagcgcggc
gaatggccggtgatcgcgctggatgatctggcttcggaactggatcgcacccaccaggcg
cgggtattggagcgcctgctcaatggcccggcacagatcttcatcaccgccaccgaaacc
ccggcggcgctgcaggaactgacccacatcgcccggttccacgtggaacatgcacagatc
gtggctgtgccatag
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