Stenotrophomonas geniculata: RKE57_21255
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Entry
RKE57_21255 CDS
T09411
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sgen
Stenotrophomonas geniculata
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgen02000
]
RKE57_21255
Transporters [BR:
sgen02000
]
Other transporters
Pores ion channels [TC:
1
]
RKE57_21255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF7162
Motif
Other DBs
NCBI-ProteinID:
WNF10541
LinkDB
All DBs
Position
4638664..4640754
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AA seq
696 aa
AA seq
DB search
MNPAARRCCLPLSALLLSPWTAVAEPAPTALPAVQVQAARVPGIDPFALPASQDTVWIDA
SRAGTGAQLSEALAGVPGLLARDRQNFAQDTQLSIRGFGARSTFGVRGVRVLIDGVPATM
PDGQGQLSHASLLGAERIDVLRGPFSALYGNSSGGVLQVWSAQGQAGDPWRLRLNAGADN
TLSVGAQLKGAGHLLDYNIAANHLRTDGWRDHSRARRESLNARIGGALGGGRLELLLNAL
DAPDAQDPLGLTRAQVAADPRQATAVAHPYNTRKSVRQQQAGLRWTRETGAQRWQLMGYA
GQRAVTQFLPIPPTAQANPLHAGGVIDLDAGYGGLDARWGWHGDLAGRPLDLVAGLSADR
QRQHRTGYENFLGSTLGVRGRLRRDQIDTVHNVDQFAQAWWQWSPRWSLLAGLRHSTVRF
ESDDRYIIGRNPDDSGRRRYQATTPVAGISFEASPQWRLHAAVGRGFETPTFNELGYRAD
GQAGLALDLAAARSRNLEIGSKWHAQGGIQLDISLFRADTDNELAVASNTGGRSTYRNIG
RTRRQGVELQYRQPLAEQLELQLAWTWLQAQVRSPYLTSNNVVAAGSRLPGVPRQQAFAR
LQWSPADWQWALEATASSDTVVNDVATERAPGFALLHVEGGRRWTLPGGELRAFARLENV
LDQAYIGSVIVNDGNGRYYEPGPGRRASVGVQWSWR
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgccgcacgacgctgttgccttccgctgtctgccctgctgctgtcgccctgg
acagcggtggccgagcctgcgcccaccgccctgcctgcggtgcaggtacaggccgcacgg
gtgccgggcatcgacccgttcgcgctgccggccagccaggacacggtctggatcgatgcc
agccgcgctggcaccggcgcgcagctgtccgaggcgctggccggggtaccggggctgctg
gcgcgcgaccggcagaacttcgcgcaggacacgcagctgtcgatccgtggcttcggcgcg
cgctcgaccttcggtgtgcgcggggtgcgggtgttgatcgacggcgtgccggccaccatg
cccgatggccagggccagctgtcacacgccagcctgctgggcgccgagcgcatcgacgtg
ctgcgcgggccgttctcggcgctgtacggcaactcctccggtggcgtgctgcaggtctgg
agcgcgcagggccaggccggcgacccgtggcggttgcggctcaacgctggtgccgacaac
acgctcagtgtcggcgcgcagctgaagggtgccggccacctgctggactacaacatcgcc
gccaatcacctccgcaccgatggctggcgggaccacagccgtgcgcgccgtgaatcgctc
aacgcacgcatcggtggtgcgctgggcggtgggcggctggagctgttgctcaatgcgctc
gatgcccccgatgcacaggatccgctgggcctgacccgtgcccaggtggcggctgatccg
cgccaggccacggcggtggcgcacccgtacaacacccgcaaatcggtgcgccagcagcag
gccggcctgcgctggacccgtgaaacgggagcgcagcgctggcagttgatgggctatgcc
gggcagcgcgcggtgacccagttcctgcccattccgcccacggcgcaggccaatccgctg
catgccggcggcgtgatcgatctggacgccggctacggcgggctggacgcgcgctggggc
tggcacggcgatctggccgggcgaccgctggacctggtggccgggctcagcgccgaccgc
cagcgccagcatcggaccggctacgagaacttcctcggcagcacgctgggcgtacggggg
cgcctgcgcagagaccagatcgacaccgtgcataacgtcgatcagttcgcgcaggcgtgg
tggcagtggagtccacgctggtcattgctggctggcctgcgccacagcaccgtgcgcttc
gaatccgacgaccgctacatcatcggccgcaacccggatgacagtggccgccggcgctac
caggccaccacgccggtggccgggatcagctttgaggccagcccgcagtggcggctgcat
gctgcggtcggccgcggtttcgaaacccccaccttcaacgaactgggctatcgcgccgac
gggcaggcgggattggcactggatctggcggccgcccgcagccgcaatctggagattggc
agcaagtggcacgcgcagggcggaatccagctcgatatcagcctgttccgtgcagatacc
gacaatgagctggccgttgccagcaacaccggagggcgcagcacctatcgcaacattggc
cgcacccgccgccagggcgtggaactgcagtaccgacagccgctggccgagcaattggaa
ctgcagttggcctggacctggctgcaggcgcaggtgcgctcgccttacctgacctcgaac
aacgtggtcgcggcgggcagtcgcttgccgggtgtgccgcgccagcaggcgttcgcccgc
ctgcagtggagccccgccgactggcaatgggcactggaggccacggccagcagcgatacc
gtggtcaacgacgtcgccaccgaacgggcgccgggctttgccctgttgcacgtggagggc
ggacgccgctggaccctgcccggcggtgaactgcgtgccttcgcgcggctggagaacgtg
ctggaccaggcctacatcggctcggtgatcgtcaacgatggcaatggccgctactacgag
cccgggccgggacggcgggccagcgtgggtgtgcagtggtcgtggcgctag
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