Streptomyces griseofuscus: HEP81_02228
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Entry
HEP81_02228 CDS
T07010
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
sgf
Streptomyces griseofuscus
Pathway
sgf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sgf00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HEP81_02228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgf03021
]
HEP81_02228
Transcription machinery [BR:
sgf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HEP81_02228
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
DUF7093
Sigma70_r1_1
CIS_TMP
Motif
Other DBs
NCBI-ProteinID:
QNT92554
UniProt:
A0A7H1PWX4
LinkDB
All DBs
Position
complement(2525411..2526946)
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AA seq
511 aa
AA seq
DB search
MSASTSRTLPPEIAESVSVMALIERGKAEGQIAGDDVRRAFEADQIPATQWKNVLRSLNQ
ILEEEGVTLMVSAAEPKRTRKSVAAKSPAKRTATKTVAAKTVTTRKATATTAAPEASATP
ADPADEASPAKKAAAKKTTAKKAVAKKTTAKKTAAKKTSGKKDDAEILEDEVLEDTKVGD
EPEGTENAGFVLSDEDEDDAPAQQVAAAGATADPVKDYLKQIGKVPLLNAEQEVELAKRI
EAGLFAEDKLANADKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYTGRGMLF
LDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVIN
KLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGD
LIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYG
VTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccagcacatcccgtacgctcccgccggagatcgccgagtccgtctctgtcatg
gcgctcattgagcggggaaaggctgaggggcagatcgccggcgacgatgtgcgtcgggcc
ttcgaagctgaccagattccggccactcagtggaagaacgtactgcgcagcctcaaccag
attcttgaggaagagggtgtgacgctgatggtcagtgcagcagagcccaagcgcacccga
aagagcgtcgcagcgaagagcccggccaagcgcaccgccaccaagacggtcgcggcgaag
acggtgaccaccaggaaggccaccgccaccacggccgcccccgaggcgtccgccaccccg
gccgatcccgccgatgaggcctcgcccgccaagaaggccgcggccaagaagacgaccgcc
aagaaggcggttgccaagaagaccaccgccaagaagacggcggcaaagaagacctcgggc
aagaaggacgacgccgagatcctcgaggacgaggtccttgaggacaccaaggtcggcgac
gagcccgagggcaccgagaacgcgggcttcgtcctgtccgacgaggacgaggacgacgcg
cccgcgcagcaggtcgccgcggccggcgccaccgccgacccggtcaaggactacctgaag
cagatcggtaaggtccccctgctcaacgccgagcaggaggtcgagctcgccaagcgcatc
gaggccggcctgttcgccgaggacaagctcgcgaacgccgacaagctcgccccgaagctc
aagcgcgagctggagatcatcgccgaggacggccgccgcgccaagaaccacctgctggag
gccaacctccgtctggtggtctccctggccaagcgctacaccggccgcggcatgctcttc
ctggacctcatccaggagggcaacctcggtctgatccgcgccgtcgagaagttcgactac
accaagggctacaagttctccacgtacgccacctggtggatccgacaggcgatcacccgc
gccatggccgaccaggcccgcaccatccgtatcccggtgcacatggtcgaggtcatcaac
aagctcgcccgtgtgcagcgccagatgctccaggacctgggccgcgagcccaccccggag
gagctggccaaggaactcgacatgaccccggagaaggtcatcgaggtccagaagtacggc
cgcgagcccatctccctgcacacccccctgggtgaggacggcgacagcgagttcggtgac
ctcatcgaggactccgaggccgtcgtccccgcggacgccgtcagcttcaccctcctccag
gagcagctgcactcggtcctggacaccctctccgagcgcgaggccggcgtcgtctccatg
cgcttcggcctcaccgacggccagccgaagaccctggacgagatcggcaaggtctacggc
gtgacgcgtgagcgcatccgccagatcgagtccaagaccatgtcgaagctgcgccacccg
tcgcgctcccaggtgctgcgcgactacctcgactag
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