KEGG   Streptomyces griseofuscus: HEP81_02228
Entry
HEP81_02228       CDS       T07010                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
sgf  Streptomyces griseofuscus
Pathway
sgf02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:sgf00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    HEP81_02228
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sgf03021]
    HEP81_02228
Transcription machinery [BR:sgf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HEP81_02228
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HC2 DUF7093 Sigma70_r1_1 CIS_TMP
Other DBs
NCBI-ProteinID: QNT92554
UniProt: A0A7H1PWX4
LinkDB
Position
complement(2525411..2526946)
AA seq 511 aa
MSASTSRTLPPEIAESVSVMALIERGKAEGQIAGDDVRRAFEADQIPATQWKNVLRSLNQ
ILEEEGVTLMVSAAEPKRTRKSVAAKSPAKRTATKTVAAKTVTTRKATATTAAPEASATP
ADPADEASPAKKAAAKKTTAKKAVAKKTTAKKTAAKKTSGKKDDAEILEDEVLEDTKVGD
EPEGTENAGFVLSDEDEDDAPAQQVAAAGATADPVKDYLKQIGKVPLLNAEQEVELAKRI
EAGLFAEDKLANADKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYTGRGMLF
LDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVIN
KLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGD
LIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYG
VTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq 1536 nt   +upstreamnt  +downstreamnt
gtgtcggccagcacatcccgtacgctcccgccggagatcgccgagtccgtctctgtcatg
gcgctcattgagcggggaaaggctgaggggcagatcgccggcgacgatgtgcgtcgggcc
ttcgaagctgaccagattccggccactcagtggaagaacgtactgcgcagcctcaaccag
attcttgaggaagagggtgtgacgctgatggtcagtgcagcagagcccaagcgcacccga
aagagcgtcgcagcgaagagcccggccaagcgcaccgccaccaagacggtcgcggcgaag
acggtgaccaccaggaaggccaccgccaccacggccgcccccgaggcgtccgccaccccg
gccgatcccgccgatgaggcctcgcccgccaagaaggccgcggccaagaagacgaccgcc
aagaaggcggttgccaagaagaccaccgccaagaagacggcggcaaagaagacctcgggc
aagaaggacgacgccgagatcctcgaggacgaggtccttgaggacaccaaggtcggcgac
gagcccgagggcaccgagaacgcgggcttcgtcctgtccgacgaggacgaggacgacgcg
cccgcgcagcaggtcgccgcggccggcgccaccgccgacccggtcaaggactacctgaag
cagatcggtaaggtccccctgctcaacgccgagcaggaggtcgagctcgccaagcgcatc
gaggccggcctgttcgccgaggacaagctcgcgaacgccgacaagctcgccccgaagctc
aagcgcgagctggagatcatcgccgaggacggccgccgcgccaagaaccacctgctggag
gccaacctccgtctggtggtctccctggccaagcgctacaccggccgcggcatgctcttc
ctggacctcatccaggagggcaacctcggtctgatccgcgccgtcgagaagttcgactac
accaagggctacaagttctccacgtacgccacctggtggatccgacaggcgatcacccgc
gccatggccgaccaggcccgcaccatccgtatcccggtgcacatggtcgaggtcatcaac
aagctcgcccgtgtgcagcgccagatgctccaggacctgggccgcgagcccaccccggag
gagctggccaaggaactcgacatgaccccggagaaggtcatcgaggtccagaagtacggc
cgcgagcccatctccctgcacacccccctgggtgaggacggcgacagcgagttcggtgac
ctcatcgaggactccgaggccgtcgtccccgcggacgccgtcagcttcaccctcctccag
gagcagctgcactcggtcctggacaccctctccgagcgcgaggccggcgtcgtctccatg
cgcttcggcctcaccgacggccagccgaagaccctggacgagatcggcaaggtctacggc
gtgacgcgtgagcgcatccgccagatcgagtccaagaccatgtcgaagctgcgccacccg
tcgcgctcccaggtgctgcgcgactacctcgactag

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