Streptomyces griseofuscus: HEP81_04029
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Entry
HEP81_04029 CDS
T07010
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sgf
Streptomyces griseofuscus
Pathway
sgf03030
DNA replication
sgf03430
Mismatch repair
sgf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HEP81_04029
03430 Mismatch repair
HEP81_04029
03440 Homologous recombination
HEP81_04029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgf03032
]
HEP81_04029
03400 DNA repair and recombination proteins [BR:
sgf03400
]
HEP81_04029
Enzymes [BR:
sgf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HEP81_04029
DNA replication proteins [BR:
sgf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HEP81_04029
DNA repair and recombination proteins [BR:
sgf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HEP81_04029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
Rad17
AAA_30
AAA_14
zf-CXXC
AAA_5
AAA_18
nSTAND3
AAA_16
Mg_chelatase
AAA_19
AAA_28
TsaE
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
QNT94319
UniProt:
A0A7H1Q1Y9
LinkDB
All DBs
Position
4492156..4494501
Genome browser
AA seq
781 aa
AA seq
DB search
MSVHAYNLVSVSSLALYRRYRPETFAEVIGQEHVTDPLQQALRNNRVNHAYLFSGPRGCG
KTTSARILARCLNCEQGPTPTPCGECQSCQDLARNGPGSIDVIEIDAASHGGVDDARELR
EKAFFGPAGSRYKIYIIDEAHMVTSAGFNALLKVVEEPPEHLKFIFATTEPEKVIGTIRS
RTHHYPFRLVPPGTLRDYLGEVCQKEDIPVEDGVLPLVVRAGAGSVRDSMSVMDQLLAGA
GADGVTYTMATALLGYTDGSLLDSVVEAFATGDGAAAFEVVDHIIEGGNDPRRFVADLLE
RLRDLVILAAVPDAVDKGLIDAPADVLERMQAQASTFGAAELSRAADLVNQGLTEMRGAT
SPRLQLELICARVLLPAAYGDERSLMARLDRIERGVNFSAGAGAPAMGYVPGPEAHGGAP
AVTVPPGGGPAAARAAARGVPGGAAPGNGPGPVPGAGGVPGAGGVGGAPSAPAAAPIAPA
PAPAPTPAPEPAAPVAPAPAPAPVEQPAPAAQAAPASGAPGAWPTAAPVGGGRRPGGWPT
AAAPGAPQQQAPAAAPRPQGAQPALAAPAPSAPQPPAAAPAGGLDPRMLWPNILEAVKNR
RRFTWILLSQNAQVTGFDGTTLQLGFVNAGARDNFASSGSEDVLRAALAEQFNVQWKIES
LIDPSGGGSAPPAPGGGSAGFGGGSGAPSGGYGGGGAPAGSGYGSSPAPRAPSPQPSAPA
STPPVSGPASPRPAAPEPPPVSPEDDIPEDDDPDLDESALSGHDLIMRELGATVVEEFTN
E
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagtgcacgcctataacctcgtaagcgtgtcgtctctcgcgctgtaccgccgctac
cgtcccgagacctttgccgaggtcatcgggcaggagcatgtcaccgacccgttgcagcag
gcgctgcgcaacaaccgggtcaatcacgcgtacctgttcagcgggccgcgtggctgcggg
aagaccaccagcgcgcgcatcctcgcccgctgcctcaactgcgagcagggccccaccccc
accccgtgcggcgagtgccagtcctgccaggacctcgcgcgcaacggaccgggttcgatc
gacgtcatcgagatcgacgccgcctcccacggtggcgtggacgacgcccgtgaactgcgc
gagaaggcattcttcggccccgcgggcagccggtacaagatctacatcatcgacgaggcc
cacatggtcacgtcggccggcttcaacgccctgctgaaggtcgtcgaggagccgcccgag
cacctcaagttcatcttcgccacgaccgagcccgagaaggtcatcggcaccatccgctcg
cggacccaccactacccgttccggctggtgccgcccggcaccctgcgggactacctcggc
gaggtgtgccagaaggaggacatccccgtcgaggacggtgtgcttcccctggtggtgcgc
gcgggcgccggatccgtccgtgactccatgtcggtcatggaccaactcctcgccggcgcg
ggcgcggacggtgtgacgtacaccatggccaccgccctcctcggctacaccgacggctcc
ctcctcgactccgtggtcgaggccttcgccaccggtgacggcgcggccgccttcgaggtc
gtcgaccacatcatcgagggcggcaacgacccgcgccgcttcgtcgccgacctgctcgaa
cgcctccgcgacctggtgatcctcgccgccgtgccggacgccgtcgacaaggggctcatc
gacgcccccgccgacgtcctggagcgcatgcaggcccaggcgtccaccttcggcgcggcc
gagctgagccgcgccgccgacctggtcaaccagggcctgaccgagatgcgcggcgccacc
tcgccccgcctccagctcgaactcatctgcgcccgcgtcctgctccccgctgcctacggc
gacgagcgctccctcatggcccgcctcgaccgcatcgagcgcggcgtcaacttcagcgcc
ggcgccggcgcccccgccatgggctacgtccccggcccggaggcccacggcggcgccccc
gccgtgacggtcccacccggcggcggcccggctgcggcccgggcggcggcgcggggagtg
ccgggcggagcggctcctggcaacggtcccggtccggttccgggtgccggtggtgtgcct
ggtgccggtggcgtcggtggtgcgccttcggctccggctgccgctccgatcgcgccagca
cctgcccccgctcccacccctgctcccgagcccgccgctccggtggcgcccgctccggcc
cctgcccccgtcgagcagccggccccggccgctcaggctgctcccgcatccggcgccccc
ggtgcctggcccacggccgctcccgtcggtggcggacggcgccccggtggctggcccacc
gccgccgcgcccggcgccccgcagcagcaggcccccgcggccgccccccggccgcagggg
gcccagccggctctcgccgcccccgcgccctcggctccccagcctcccgcggccgccccc
gccggtgggctcgacccccggatgctctggccgaacatcctggaggccgtgaagaaccgc
cggcgcttcacctggatcctgctcagccagaacgcccaggtcaccggcttcgacggcacc
acgctccagctgggcttcgtgaacgccggggctcgtgacaacttcgcgagcagcggcagc
gaggacgtgctgcgggccgcgctggccgagcagttcaacgtgcagtggaagatcgagtcg
ctgatcgacccgtccggcggcggctccgcgccccctgccccgggcggcggctcagcgggc
ttcggtggcggctcgggtgcccccagcggcggttacggcggtggcggcgcgcccgccggc
agcggctacggctcctcgcccgcgccccgcgccccttccccccagccctccgcccccgcg
tccacacccccggtatccggcccggcgagccctcgccccgccgcccccgagccgcccccc
gtctcccccgaggacgacatccccgaggacgacgaccccgacctggacgaatccgccctc
tccggccacgacctgatcatgcgcgaactgggcgcgacagtggtggaggaattcaccaac
gagtga
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