Streptomyces griseofuscus: HEP81_04267
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Entry
HEP81_04267 CDS
T07010
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
sgf
Streptomyces griseofuscus
Pathway
sgf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sgf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HEP81_04267
09124 Replication and repair
03420 Nucleotide excision repair
HEP81_04267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgf03021
]
HEP81_04267
03400 DNA repair and recombination proteins [BR:
sgf03400
]
HEP81_04267
Enzymes [BR:
sgf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HEP81_04267
Transcription machinery [BR:
sgf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HEP81_04267
DNA repair and recombination proteins [BR:
sgf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HEP81_04267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
ETAA1
IMD
AAA_22
YflT
Motif
Other DBs
NCBI-ProteinID:
QNT94544
UniProt:
A0A7H1Q2L4
LinkDB
All DBs
Position
complement(4727070..4728746)
Genome browser
AA seq
558 aa
AA seq
DB search
MPRVNGPLIVQSDKTLLLEVDHERADDCRRAIAPFAELERAPEHIHTYRVTPLGLWNARA
AGHDAEQVVDALVEYSRYPVPHALLVDIAETMDRYGRLTLSKHPAHGLVLTTTDRPVLEE
VLKSKRISPLVGARIDPDTVVVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHPIDLRED
GWTLRPYQKQAVENFWHGGSGVVVLPCGAGKTLVGAASMAEAKSTTLILVTNTVSARQWK
HELVKRTSLTEDEIGEYSGTRKEIRPVTIATYQVLTTKRKGVYPHLELFDSRDWGLIVYD
EVHLLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYI
APADCVEVRVNLTESERLAYATAETEEKYRFCATTDTKRKVTEAIVRRFAGQQILVIGQY
IDQLDELGEHLNAPVIKGETSNAQREKLFDAFREGEINVLVVSKVANFSIDLPEATVAIQ
VSGTFGSRQEEAQRLGRVLRPKADGHQAHFYSVVARDTIDQDFAAHRQRFLAEQGYAYRI
MDADEILAEAEGRSEPEG
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcgcgtgaacggtccactgatcgtccagtccgacaagaccctgctcctggaggtc
gaccacgagcgggccgacgactgccggcgggccatcgcgccgttcgccgagctggagcgg
gcgcccgagcacatccacacctatcgggtcacgccgctcgggctgtggaacgcgcgggcc
gcggggcacgacgcggagcaggtcgtggacgcgctggtggagtacagcaggtacccggta
ccgcacgcgctgctcgtggacatcgccgagacgatggaccgctacggccgcctcaccctc
tccaagcaccccgcgcacggactggtcctgacgaccaccgaccggccggtgctggaggag
gtcctgaagtccaagcggatcagtccgctggtcggcgcgcggatcgaccccgacaccgtg
gtggtgcacccctccgagcgcgggcagatcaagcagacgctgctcaagctgggctggccg
gccgaggacctcgcgggctatgtggacggcgaggcgcaccccatcgacctgcgcgaggac
ggctggaccctgcggccgtaccagaagcaggccgtggagaacttctggcacggcggcagc
ggtgtcgtggtgctgccctgcggtgcgggcaagacgctggtgggtgccgcgtccatggcg
gaggcgaagtcgaccacgctgatcctggtgaccaacaccgtctccgcccggcagtggaag
cacgagctggtgaagcggacctcgctgaccgaggacgagatcggcgagtacagcgggacc
cgcaaggagatccgcccggtcaccatcgccacctaccaggtgctgacgaccaagcggaag
ggcgtctatccgcacctggagctgttcgactcccgggactgggggctgatcgtctacgac
gaggtgcatctgctgccggctcccgtcttcaagttcaccgccgatctccaggcacggcgg
cggctgggactgaccgccacgctggtgcgcgaggacggccgtgagtcggatgtgttctcc
ctgatcgggcccaagcggttcgacgcgccctggaaggagatcgaggcgcagggctatatc
gcgcccgccgactgcgtcgaggtccgggtgaatctgacggagtccgagcggctggcgtac
gcgacggccgagacggaggagaagtaccgcttctgtgccaccacggacaccaagcggaag
gtcacggaggcgatcgtccgcaggttcgcgggccagcagatcctggtgatcgggcagtac
atcgaccaactcgacgagctgggcgagcacttgaacgccccggtgatcaagggcgagacc
tccaacgcccagcgcgagaagctcttcgacgccttccgtgagggcgagatcaatgtgctg
gtggtgtccaaggtcgcgaacttctccatcgacctgcccgaggccaccgtcgccatccag
gtgtccggcaccttcggctcccgccaggaggaggcccagcggctcggccgggtgctgcgg
cccaaggccgacggccaccaggcccacttctactcggtcgtggcccgcgacaccatcgac
caggacttcgccgcccaccgccagcgcttcctggccgagcagggctacgcctaccggatc
atggacgcggacgagatcctcgcggaggcggagggccggtccgagccggagggctga
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