Streptomyces griseofuscus: HEP81_04748
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Entry
HEP81_04748 CDS
T07010
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sgf
Streptomyces griseofuscus
Brite
KEGG Orthology (KO) [BR:
sgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgf03021
]
HEP81_04748
Transcription machinery [BR:
sgf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HEP81_04748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_24
HTH_3
MarR_2
Sigma70_ECF
MarR
NirdL-like_HTH
DUF7343
IF2_N
KORA
Motif
Other DBs
NCBI-ProteinID:
QNT95020
UniProt:
A0A7H1Q3Z0
LinkDB
All DBs
Position
complement(5198543..5199439)
Genome browser
AA seq
298 aa
AA seq
DB search
MSPRLDASPAPTATSTPPPVQLDHPIDLHDPFEGLPEIPPYDEVGPVDARALSKTLFGRL
EALEEGTHEYAYVRNTLVELNLALVKFAASRFRSRSEPMEDIIQVGTIGLIKAIDRFELS
RGVEFPTFAMPTIIGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGDELAQQLDRAPTVAE
LAERLGISNDEVVEGMAASNAYTASSLDAQPEEDETEGALADRIGYEDHGIEGIEYIESL
KPLIAGLPQRDRKILSLRFVANMTQSEIGEELGISQMHVSRLLSRTLVRLRKGLTVEE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacgcctcgcctgccccgaccgcgacgtcgacacccccaccggta
caactggatcatcccatcgatctccatgaccccttcgagggactcccggagatccccccg
tacgacgaggtcggccccgtcgacgcacgggccctgtccaagaccctcttcgggcgcctg
gaagcgctggaggaagggacgcacgaatacgcgtacgtccgcaacaccctcgtcgagctg
aacctcgcgctcgtcaagttcgccgcctcccgcttccgctcccgcagtgagccgatggag
gacatcatccaggtcggcaccatcggcctgatcaaggcgatcgaccgcttcgagctctca
cgcggtgtcgagttccccactttcgcgatgccgaccatcatcggcgagatcaagcgcttc
ttccgtgacacctcgtggtccgtgcgcgtaccgcgccggctccaggagctgcgtctggac
ctggcgaaggccggggacgagctggcccagcagctggaccgcgcgccgaccgtggcggag
ctggccgagcgcctgggcatctcgaacgacgaggtcgtcgagggcatggccgcctcgaac
gcgtacaccgcctcgtcgctggacgcccagcccgaggaggacgagaccgagggcgcgctc
gcggaccgcatcgggtacgaggaccacgggatcgagggcatcgagtacatcgagtcgctc
aagcccctgatcgccgggctgccccagcgcgaccggaagatcctctcgctgcggttcgtg
gccaacatgacccagtcggagatcggcgaggaactgggcatctcccagatgcacgtgtcc
cgcctcctgtcccgcacgctggtacggctgcgcaagggtctgaccgtggaggagtga
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