Streptomyces griseofuscus: HEP81_05787
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Entry
HEP81_05787 CDS
T07010
Name
(GenBank) ATP-dependent helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
sgf
Streptomyces griseofuscus
Brite
KEGG Orthology (KO) [BR:
sgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgf03019
]
HEP81_05787
Enzymes [BR:
sgf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HEP81_05787
Messenger RNA biogenesis [BR:
sgf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HEP81_05787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
AAA_19
AAA_22
AAA_25
ResIII
AAA_30
AAA_11
nSTAND3
NTPase_1
Helicase_RecD
AAA
Motif
Other DBs
NCBI-ProteinID:
QNT96038
UniProt:
A0A7H1Q6V8
LinkDB
All DBs
Position
complement(6337594..6340155)
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AA seq
853 aa
AA seq
DB search
MIRYDALDALPVRSALPALTDALAADGTAVLVAPPGTGKTTLVPLVLAGLVGDGPARRVV
VAEPRRIAARAAARRMAWLVGERPGESVGFTVRGERAVGRCTRVEVVTTGVLLQRLQRDQ
ELAGVDVVVLDECHERHLDADTVAAFLWDVRQALRPELRLVAASATTDAQGWSRLLGGAP
VVEAAGTAHPVEVVWAPPVRPVRPPHGMRVDPALLAHVASVVRRALAERDGDVLCFLPGV
GEIARVAAQLGAPAGVEVLQVHGRAPAAVQEAVLSAGERRRVVLATSVAESSLTVPGVRV
VVDSGLAREPRVDHARGLSGLTTVRASRAAGRQRAGRAGREAPGAVYRCWAEAEDGRLPA
FPAPEIKVADLTSFALQTACWGDPDASGLALLDPPPGGAMAAARSALVAVGAVDSAGRAT
ERGVRLSRLGLHPRLGRALLDTSGAGAEVVALLSEEVPREYGDDLAGALRSARRGGDAYA
GRWAAEVRRLRSVAAEFSGPPGQESGPRVSPGPGTGIRGSAQAVPSAGAGADGLVGLVAA
LAFPERIGKSDGGSYLMVSGTRAEVVEGSALRGAPWVVVAVADRPGGKGHARVRLGAAVS
EEVARAAAGAVLDERDEVRWADGDVVARRVERLGAVELTVRPLKDAAPELVRAALLEGLR
QEGPALLRWTPDAQVLRLRLAFLGARLGEPWPDVSDEALHASAERWLEPELGRARRRADL
ARIDAGQALSRLLPWASGEAVRLDELAPERMTVPSGSRIRIDYRDPERPVLAVKLQEMFG
LRETPSVAGVPLLVHLLSPAGRPAAVTADLASFWRDGYRAVRAELRGRYPKHPWPEDPAA
AEPTRHTNARLRR
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgttacgacgccctggacgcgctgcccgtgcgctccgccctgcccgccctgacc
gacgcgctcgcggccgacggcaccgccgtcctggtggcgccgcccggtaccggcaagacg
accctggtgccgctggtgctggcggggctggtcggggacgggccggcgcggcgggtcgtg
gtggccgagccgcggcggatcgcggcgcgcgcggcggcgcggcggatggcgtggctggtg
ggcgagcggcccggcgagagcgtgggcttcacggtgcgcggggagcgggccgtggggcgg
tgcacgcgggtggaggtcgtgaccacgggtgtgctgctccagcggctccagcgcgatcag
gagctggccggggtggacgtcgtcgtgctcgacgagtgccatgagcggcatctggacgcc
gacacggtggcggccttcctgtgggacgtacggcaggcgctgcggccggagctgcggctg
gtggccgcgtcggcgaccacggacgcgcagggatggtcgcggctgctgggcggggcgccg
gtggtcgaggcggcggggaccgcgcatcccgtggaggtggtgtgggcgccgccggtacgg
ccggtgcggccgccgcacgggatgcgggtggaccccgcgctgctggcgcatgtggcgtcg
gtggtgcgacgggcgctggccgagcgggacggtgacgtgctgtgtttcctgcccggggtc
ggcgagatcgcgcgggtggccgcgcagttgggtgcgccggccggggtcgaggtgctccag
gtgcacgggcgggcgcccgcggccgtgcaggaggcggtgctgtccgccggggagcggcgg
cgggtggtgctggcgacgtcggtcgcggagtcctcgctgaccgtgcccggggtgcgggtg
gtggtggactcggggctggcccgggagccccgggtggatcatgcgcgggggctcagcggg
ctgacgacggtacgggcgtcgcgggcggccgggcggcagcgggcgggccgggccgggcgg
gaggcaccgggcgcggtgtaccggtgctgggcggaggccgaggacggccgtctgccggcg
ttcccggcgccggagatcaaggtggccgacctgacgtcgttcgcgctccagacggcctgc
tggggcgatccggacgcctcgggtcttgccctgttggatccgccgccgggcggtgcgatg
gcggcggcgcgctccgcgctggtggcggtgggcgcggtggactcggcggggcgggcgacg
gaacgcggcgtacggctctcccggctggggctgcaccctcggctgggccgggcgctgctg
gacacgtccggggcgggggcggaggtggtcgcgctgctctcggaggaggtgccgcgggag
tacggcgacgatctcgccggtgcgttgcgctccgctcggcgtgggggtgacgcctacgcg
ggtcggtgggcggcggaggtacggcggctgcggtctgtcgcggcggagttctccggcccg
cccggccaggagagcgggccccgggtgagccccgggccgggcaccgggatccggggctcc
gcgcaggcggtcccgtcggccggtgccggtgcggacggcctcgtcgggctggtcgccgcg
ctcgctttccccgagcggatcgggaagtcggacggcgggtcgtacctcatggtgtccggg
acgcgggccgaggtggtggaggggtcggcgttgcggggggcgccgtgggtcgtcgtggcc
gtggccgaccggccgggcgggaaggggcatgcccgggtgcggctcggggccgcggtgtcg
gaggaggtggcgcgggcggcggcgggcgcggtgctggacgagcgggacgaggtgcgctgg
gcggacggcgatgtcgtggcccggcgggtcgagcggctcggggcggtcgagttgacggtg
cggcccttgaaggacgccgcgcctgagctggtgcgcgcggcgctgctcgaagggttgcgg
caggaggggcccgcgctgctgcggtggacgccggacgctcaggtgctgcggctgcggctg
gcgttcctgggcgcccggctcggggagccgtggccggatgtgtcggacgaggcgctgcac
gcgagtgcggagcggtggctggagccggagctgggccgggcccggcggcgggcggatctc
gcgcggatcgacgccgggcaggcgctgtcgcggctgctgccctgggcgagcggggaggcc
gtgcgcctggacgagctggcgcccgagcggatgaccgtgccgagcgggtccaggatccgg
atcgactaccgggatccggagcggccggtgctcgcggtgaagctccaggagatgttcggg
ctgcgcgagacgccgtcggtggcgggtgtgccgctgctcgtgcatctgctctcccccgcc
gggcggcccgccgcggtgacggccgatctggcgtcgttctggcgggacggctaccgggcc
gtgcgggccgagctgcgcggccgctatccgaagcacccgtggccggaggacccggcggcg
gccgagcccacccggcacaccaacgcgcggctcaggcgctga
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