Streptomyces griseofuscus: HEP81_08199
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Entry
HEP81_08199 CDS
T07010
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
sgf
Streptomyces griseofuscus
Pathway
sgf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sgf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HEP81_08199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgf03400
]
HEP81_08199
DNA repair and recombination proteins [BR:
sgf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
HEP81_08199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
Motif
Other DBs
NCBI-ProteinID:
QNT98425
UniProt:
A0A7H1QDP5
LinkDB
All DBs
Position
pSGRIFU3:62990..63922
Genome browser
AA seq
310 aa
AA seq
DB search
MPRTIWSGAISFGLVTVPINVVSATEDHSIHFHQYHLADQGRIRYRKVCELEDREVPQDE
IGKGYELTKTQVVPVTDEDLDNLPLPTARAIEIDGFVPLESVDPLRISDGYYLQPAGQVA
AKPYKLLVQALGRSAKVAIAKYAWSGRERLGILRVRDDVLVLHAMYWPDEIRDPAGLLPP
PVQVSEAEIEGALALMETMTVDRLEGPEFHDRYTEAVAEIIEAKREKKPLPETPEPEQPA
QILDLMSALQESVSKVKASRGQDAGPAEVHELPAPKKKTAAKKQPARKTAIKKTAAKKSS
DSRPRRSRSA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgccccggacgatctggagcggcgcgatcagcttcggcctggtgacggtgccgatcaac
gtggtcagcgccaccgaggaccacagcattcacttccaccagtaccacctggccgatcag
ggccggatccgttaccggaaggtgtgcgagctggaggaccgggaggtcccacaggacgag
attggcaagggctacgagctgaccaagacgcaggtcgtcccggtcaccgacgaggacctg
gacaacttgccgttgccgacggcgcgggcgatcgagatcgacggttttgtgccgctggag
tccgttgacccgctgcggatctccgacggctactacctccagcccgccgggcaggtcgcg
gccaaaccgtacaagctcctcgtccaggcgctcggccgctcggccaaggtggcaatcgcg
aagtacgcatggtccggccgcgagcgtctcggcatcctccgcgtccgcgacgacgtcctg
gtcctgcacgccatgtactggccggacgagatccgcgatcccgccgggctgctgccaccg
ccggtgcaggtgtccgaggcggagatcgagggcgcgctcgctctgatggagaccatgacc
gtcgatcggttggaagggccggagttccacgaccgctacaccgaagcggtcgccgagatc
atcgaggccaagcgcgagaagaagcccctgccggaaacgcccgagccggagcaaccggcc
cagatcctggacctgatgtctgccctccaggagtcggtgagcaaggtcaaggcgtcccgc
ggccaggacgcgggaccggccgaggtgcacgagctgccggcaccgaagaagaagacggcc
gccaagaagcagccggcccggaagaccgcgatcaagaagacagccgcgaagaagtcgtca
gacagccgcccccgccgatcccgcagcgcctag
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