Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069: SGGBAA2069_c02380
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Entry
SGGBAA2069_c02380 CDS
T01444
Symbol
pnpA
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sgg
Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069
Pathway
sgg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SGGBAA2069_c02380 (pnpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgg03019
]
SGGBAA2069_c02380 (pnpA)
03016 Transfer RNA biogenesis [BR:
sgg03016
]
SGGBAA2069_c02380 (pnpA)
Enzymes [BR:
sgg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SGGBAA2069_c02380 (pnpA)
Messenger RNA biogenesis [BR:
sgg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SGGBAA2069_c02380 (pnpA)
Transfer RNA biogenesis [BR:
sgg03016
]
Prokaryotic type
tRNA degradation factors
SGGBAA2069_c02380 (pnpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
S1_2
S1_RRP5
OB_RRP5_4th
SPATA25
Motif
Other DBs
NCBI-ProteinID:
CBZ47410
LinkDB
All DBs
Position
257730..259913
Genome browser
AA seq
727 aa
AA seq
DB search
MSKQTFETTFAGRPLVVEIGQVAKQANGAAVVRYGESTILSAAVMSKKMSTGDFFPLQVN
YEEKMYAAGKFPGGFNKREGRPTTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDE
DASAPMAAMFGSSLALSISDIPFNGPIAGVQVAYIDGEFIINPSAAQKEASLLELTVAGT
KDAINMVESGAKELSEDIMLEALLKGHEAVRELIAFQEEIVAAVGKEKAEVELLQVDPEL
QAEIIAAYNADLQKAVQVEEKKAREAATEAVKEQVIAVYEERYADDENYETIMRDVAEIL
EQMEHAEVRRLITEDKIRPDGRRVDEIRPLDAEIDYLPKVHGSGLFTRGQTQALSVLTLA
PMGETQIVDGLDPEYKKRFLHHYNFPQYSVGETGRYGAPGRREIGHGALGERALAQVLPS
LEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGSNYTI
LTDIQGLEDHFGDMDFKVAGTREGITALQMDIKIEGITPQILKEALAQAKKARFEILDLI
EATIPAPRAQLAPTAPKIDTIKIDVDKIKVVIGKGGETIDKIIEETGVKIDIDDEGNVSI
YSSDQAAIDRTKEIIAGLVREAKVGEVYHAKVVRIEKFGAFVNLFDKTDALVHISEISWS
RTANVSDVLEVGEEVDVKVIKVDDKGRVDASMKALLPRPPRAEKEHKGHSPFGGHLRDRK
EKHDKID
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacaaacttttgaaacaactttcgctggcagaccacttgttgttgagattggt
caagttgctaaacaagccaatggcgctgctgtggtacgttatggtgaatcaaccattctt
agtgcagctgtcatgtctaaaaagatgtcaacaggtgactttttcccacttcaagttaac
tatgaagaaaaaatgtatgcagctggaaaattccctggtggtttcaataaacgtgaagga
cgcccaacgactgatgcgactttgacagcgcgtttgattgaccgtccgattcgtccaatg
tttgcagaaggcttccgtaatgaagttcaagtgattaataccgttctctcttacgatgaa
gatgctagtgcgccaatggcggctatgtttggtagctcacttgctttatctatctcagat
attccatttaacggacctattgcaggcgttcaagtagcttacattgacggtgaatttatt
atcaatccgtcagctgcacaaaaagaagcctcgcttcttgagttgactgttgctggtaca
aaagatgccattaatatggttgagtctggtgccaaagaattgtcagaagacatcatgctt
gaagcgcttcttaaagggcacgaagctgttcgtgaattgattgctttccaagaagaaatc
gtcgcagctgttggtaaagaaaaagctgaggttgaattgcttcaagttgacccagaattg
caagctgaaatcatcgcagcttataacgctgaccttcaaaaagcagttcaagttgaagag
aaaaaagcgcgtgaagcagcgacagaagctgtgaaagaacaagtcattgctgtttacgaa
gaacgctacgctgacgatgaaaattacgaaactatcatgcgtgacgttgctgaaatcctt
gagcaaatggaacatgcagaagtccgtcgcttgattaccgaagacaaaattcgtcctgac
ggtcgtcgtgttgatgaaattcgtccattggatgctgaaattgattatttaccaaaagtt
cacggttcaggtcttttcacacgtggacaaacacaagcattatcagtcttgacccttgct
ccaatgggagaaacacaaattgttgacggtcttgacccagaatacaagaaacgtttctta
catcactacaatttcccacaatattcagttggtgaaacaggacgttatggcgctccaggt
cgccgtgaaatcggtcatggtgcccttggtgaacgtgctcttgcgcaagttcttcctagc
ttagaagaatttccgtatgcaatccgtcttgtagccgaagttttggaatcaaatggttca
tcttcacaagcttcaatctgtgcgggtactcttgctcttatggctgggggtgtaccaatc
aaagctccagtagcaggtattgccatgggattgatttcagacggtagcaactacacaatc
ttgacagacatccaaggtcttgaggatcactttggtgatatggactttaaagttgctggt
acacgtgaagggattacagcgcttcaaatggatattaagattgaaggaatcacccctcaa
atcttgaaagaagctcttgctcaagctaagaaagctcgttttgaaatccttgatttgatt
gaagcaactatcccagcaccacgtgctcaattggctccgacagcaccaaaaattgataca
atcaagattgacgttgataaaatcaaagttgtcatcggtaaaggtggcgaaacgattgat
aaaattatcgaagaaactggtgttaaaatcgatattgacgatgaaggaaatgtatctatt
tattcatctgaccaagctgcaattgaccgcacaaaagaaatcattgctggtttagttcgc
gaggctaaagttggtgaagtttaccatgccaaagttgttcgtatcgaaaaattcggtgcg
tttgttaatctctttgataagacagatgcccttgttcacatttcagaaatttcatggtca
cgtacggctaatgtttctgatgttttagaagtcggtgaagaagtcgatgttaaagtcatt
aaagttgatgataaaggtcgcgttgatgcttcaatgaaggctttgttaccacgtccacca
agagctgagaaagaacacaaaggacactcaccatttggcggacacttacgtgatcgtaaa
gaaaaacatgacaaaatcgactaa
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