Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069: SGGBAA2069_c04230
Help
Entry
SGGBAA2069_c04230 CDS
T01444
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
sgg
Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069
Pathway
sgg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SGGBAA2069_c04230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgg03019
]
SGGBAA2069_c04230
Messenger RNA biogenesis [BR:
sgg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SGGBAA2069_c04230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_2
ATP-synt_B
KH_KhpA-B
dUTPase
LapA_dom
Motif
Other DBs
NCBI-ProteinID:
CBZ47595
LinkDB
All DBs
Position
453818..455425
Genome browser
AA seq
535 aa
AA seq
DB search
MPNIIILIVFALIGLIVGYVLISVRLKSAKEAAELTLLNAEQDAVNLRGQAELEAEHIRK
TAERESKSHRKELLIEAKEEARKYREEIEKEFKSERQELKQMETRLTERASSLDRKDENL
TSKEKVLDSKEQSLTDKSRHINEREKQIGELEEQKKAELERVALMTIAEAREIILTETET
NLTHEIATRIKDAEREVRDKSSKLAKNILAQAMQRMAGEYVTEQTITTVHLPDDSMKGRI
IGREGRNIRTLESLTGIDVIIDDTPEVVVLSGFDPIRREIARMTLEALIQDGRIHPARIE
ELVEKNRLEMDNRIREYGEAAAFEIGALNLHPDLIKIMGRLQFRTSYGQNVLRHSVEVGK
MAGILAGELGENVTLARRAGFLHDMGKAVDREVEGSHVEIGTELARKYKENPIVVNAIAS
HHGDVEPESVIAVIVAAADALSSARPGARNESMENYIKRLRDLEEIATSFDGVQNSYALQ
AGREIRIMVQPTKVSDDEVTILAHKVREKIEGNLDYPGNIKVTVIRELRAVDYAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatattattatcttgattgtttttgccctcattggtttgatagttggttatgtg
ctgatttcagttagacttaagtctgcgaaagaagcggcagaactcactcttttaaatgca
gaacaagacgctgttaatctacgtggtcaagcggagttagaagctgagcacatcagaaaa
acagctgaacgagaaagtaaatcacatcgtaaagaattactaatcgaggcaaaagaagag
gctagaaaatatcgtgaagagattgaaaaagaatttaaatctgaaaggcaagagttaaaa
caaatggaaactcgtttaacagaacgagcttcttctcttgaccgcaaggatgaaaaccta
accagcaaggaaaaagtgttggatagtaaagaacaaagtctaaccgataaatctagacac
attaatgagcgtgaaaaacaaatcggagaactagaagaacagaaaaaagcagaacttgaa
cgcgtagcgctcatgacgattgctgaagcgcgtgaaattattttaacggaaacggaaact
aatttgacgcacgaaattgctactcgtatcaaagatgctgaacgtgaagtccgagataaa
tctagcaaacttgctaaaaatattctcgcgcaagctatgcaacgtatggcaggtgaatat
gttactgaacaaactattacaacagttcacttaccagacgatagcatgaaaggtcgtatc
attggacgtgaaggacgtaatatccgcacacttgaaagtttgacaggaattgacgttatc
attgatgatacccctgaagttgttgttctttcaggatttgatccgattcgtcgtgaaatc
gctcgaatgactttggaagctttgattcaggacggacgtattcacccagctcggatcgag
gaattggttgaaaaaaatcgtttggaaatggataaccgtattcgtgaatatggtgaggct
gctgcatttgaaattggagcccttaacttgcaccctgatttgattaaaattatgggacgc
ctgcaatttagaacatcatacggtcaaaacgtcttacgtcattctgtcgaagttggtaag
atggcaggtattctcgcaggggaacttggtgaaaatgtgacgcttgctcgtcgtgcaggt
ttcttgcatgatatggggaaagccgttgaccgtgaggttgagggaagccatgttgaaatc
ggaacggaacttgctcgtaaatacaaggaaaatccgattgtcgttaatgccattgctagt
caccacggtgatgtagaaccagaaagtgttatcgctgtgattgttgcagctgcagatgcg
cttagctcagctcgtccaggtgctcgtaacgaatcaatggaaaattacatcaaacgcctt
cgtgatttggaagaaattgccacaagctttgatggtgttcaaaatagctatgctttgcaa
gcaggacgtgaaatccgcatcatggtgcaaccaactaaagtttctgatgatgaggtaaca
atcttagctcacaaagttcgtgaaaaaattgagggtaatcttgattacccaggtaacatt
aaagttaccgttatccgtgaacttcgtgcagttgactatgcaaaataa
DBGET
integrated database retrieval system
