Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069: SGGBAA2069_c06130
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Entry
SGGBAA2069_c06130 CDS
T01444
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sgg
Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069
Pathway
sgg03030
DNA replication
sgg03430
Mismatch repair
sgg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SGGBAA2069_c06130 (holA)
03430 Mismatch repair
SGGBAA2069_c06130 (holA)
03440 Homologous recombination
SGGBAA2069_c06130 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgg03032
]
SGGBAA2069_c06130 (holA)
03400 DNA repair and recombination proteins [BR:
sgg03400
]
SGGBAA2069_c06130 (holA)
Enzymes [BR:
sgg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SGGBAA2069_c06130 (holA)
DNA replication proteins [BR:
sgg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SGGBAA2069_c06130 (holA)
DNA repair and recombination proteins [BR:
sgg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SGGBAA2069_c06130 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
CBZ47785
LinkDB
All DBs
Position
643972..645033
Genome browser
AA seq
353 aa
AA seq
DB search
MVFCYNIFMIAIEEIDKLRKENLSLITVVTGEDLGQFSQLKERMMARVGYDKDDLTYSYF
DMAEVDYQDAEMDLESLPFFADQKVVIFDNLLDITTAKKSYLDDKALKRFEAYLENPLDT
TRLIIFAPGKLDGKRRLVKILKRDAQIFEASELKEAELKTYFQKLAHKENLTFDSGVFEA
LLLKSNYDFSEILKNIAFLKSYKKDGHITADDINQAIPKTLQDNIFDLTQFVLNGKIDEA
RELIRDLRLQGEDEIKLIAIMLGQFRMFLQVSILASQGKNEQQTVTALSDYLGRRVNPYQ
VKFALRDSRTLSMPFLKKALAVLIETDYAIKTGTYDKAYLFDIAILKIAHEHH
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggttttttgttataatatctttatgattgcaatcgaagaaattgataaattacgaaaa
gaaaatcttagtttgattacggtggtgacaggtgaggatttgggacaattttctcaactg
aaagagcgtatgatggcacgtgttggttatgataaggatgacttgacttattcttatttt
gatatggctgaggttgattatcaagatgcggaaatggatcttgagagtctgccatttttt
gctgaccaaaaggtggttatttttgataatttgctcgacatcacgacagctaagaagtct
tatttggatgataaggcactcaaacgttttgaggcatatttggaaaatcccttggatacg
acgcgcttgattatttttgcaccagggaaattagacggcaaacgtcgcttggtgaaaatt
cttaaacgtgatgcacagatttttgaagcaagtgaattaaaagaagcagagctaaaaacg
tatttccaaaaattggctcacaaagaaaatctgacctttgattcaggtgtttttgaggct
ttgcttttgaaatccaattatgatttcagtgagattttgaaaaacattgcttttttgaaa
tcttataaaaaagatggtcatatcacggcagatgatattaatcaagccattcccaaaacg
cttcaggataatattttcgacttgacgcagtttgttttgaatggcaaaatcgatgaggca
cgtgagctgattcgtgatttgcgtttgcaaggtgaggatgaaatcaaattgattgcgatt
atgttagggcagtttcgcatgttcttgcaagtcagcattttagccagtcaaggtaaaaac
gagcagcaaactgtaacggcgctgtcagattatcttggacgtcgtgtcaatccttatcaa
gttaagtttgctttgcgtgactctcgtacgctttcaatgccgttcttgaaaaaagctctg
gcggtattgattgaaacggattatgccattaaaactgggacatatgataaggcttattta
tttgatattgctatcttaaaaatcgctcatgaacatcactaa
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