Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069: SGGBAA2069_c07860
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Entry
SGGBAA2069_c07860 CDS
T01444
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sgg
Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069
Pathway
sgg03410
Base excision repair
sgg03430
Mismatch repair
sgg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SGGBAA2069_c07860 (recJ)
03430 Mismatch repair
SGGBAA2069_c07860 (recJ)
03440 Homologous recombination
SGGBAA2069_c07860 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgg03400
]
SGGBAA2069_c07860 (recJ)
DNA repair and recombination proteins [BR:
sgg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SGGBAA2069_c07860 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SGGBAA2069_c07860 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SGGBAA2069_c07860 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
DUF218
TPP_enzyme_N
Usp
Motif
Other DBs
NCBI-ProteinID:
CBZ47958
LinkDB
All DBs
Position
832734..834941
Genome browser
AA seq
735 aa
AA seq
DB search
MITSKYNWKNIEKEPDNGFFELTKKEKLTELASQILYSRGVDTVEKLTQFLSTDLSQLHD
PYLLHDMDKAVERIRQAIENYEQILVYGDYDADGMTSASIMKEALEMLGAEAQVYLPNRF
TDGYGPNESVYKYFIEQQNVSLIITVDNGVAGHEAIAYAQSQGVDVIVTDHHGLPAELPE
AFAIVHPEHPEADYPFKYLAGCGVAFKVACALLESIPTEMLDLVAIGTIADMVSLTDENR
IMVKVGLEILKQTERIGLIELMKVSDVDMGDVNEETVGFKIAPQLNALGRLDDPNPAVEL
LTGFDDEEAHNIAKMINAKNEERKEIVQKIFEEAMSMVDLEKPVQVLAKEGWHPGVLGIV
AGRILEQIAQPVIVLNIEDGLAKGSARSIEAINIFHALDEHRGLFEAFGGHAGAAGMTLV
TENLDKLSQVLCDYIAENDIDLSQKKELVIDEVLELSEIDLDTVHSLEKLAPFGMDNPKP
VFEIKDFVVKQARTMGQNGAHLKLKIAQGTTAIDLVAFNQGHLAQEFQQAQNLCLATTLS
INKWNGQTTVQLMLEDARVEGVQLIDIRSKTASLPERVPVLAEDSTANEVVVLDIPDKAE
ELKSLFVGRHFEAVYFKNHIKRAYYLTGYGTRDQFAKLYKTIYQFPEFDVRYKLKDLSQY
LNIPDILLVKMIQIFDELDFVTITDGVMVVNKDAQKRSISESQIYQDLKQQVKFQELMAL
GTPQEIYDWLTDEDD
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgataacaagtaaatacaattggaaaaatattgaaaaagagccagataatggctttttt
gagctgacaaaaaaagaaaaactaacagaattagctagtcagattctttatagccgaggt
gttgatacggtagaaaaattgactcaatttttatcaacggatttgtcacaattgcatgac
ccttaccttttacatgacatggataaagcggttgagcgtattcgccaagccattgagaac
tacgagcaaattttggtttatggtgattatgatgctgacggaatgactagtgccagtatt
atgaaagaagcccttgaaatgttaggcgctgaagctcaagtttatctgccaaatcgtttc
acagacggctatggtcccaatgaatcggtctataaatatttcattgagcagcaaaacgtt
tctttgattatcacggtggacaatggcgtagcagggcacgaagcgattgcctacgcacaa
agtcagggggtagatgtcattgtgacagaccaccacggcttgccagcagagctaccagaa
gcatttgcgattgtgcacccagaacacccagaagctgattatccgttcaaatatctggct
ggctgtggcgttgctttcaaagtcgcttgtgctttgctagaatctattccgacagaaatg
cttgatctggtggcaattggaacaattgctgatatggtgagtttgactgatgaaaaccgt
attatggttaaagtcggacttgaaattctgaaacaaaccgaacgcattggtctgattgaa
ttgatgaaagtctcagacgtggatatgggagatgtcaatgaagaaacggttggtttcaaa
attgctccgcagctaaatgcacttggtcgcctagatgacccaaatcctgctgtcgaatta
ttgactggctttgatgacgaagaagcgcataacattgccaagatgattaatgctaaaaac
gaagaacgcaaggaaattgttcaaaaaatcttcgaagaagccatgagcatggttgatttg
gaaaagccagtgcaagtattggctaaagaaggttggcacccaggcgttttaggaattgtc
gcagggcgtattttagaacaaatcgcgcagccagtgattgttttaaatatcgaagatggg
cttgctaaaggttcagccagaagtattgaggccattaatattttccatgcccttgatgag
caccgtggcttatttgaagcctttggtggacacgctggcgctgctggaatgactttggtg
actgaaaatcttgataaattatcacaagttttgtgtgattatattgctgaaaatgatatt
gacctatcacagaaaaaagagcttgttattgatgaggttctggagctatcagagattgac
cttgataccgtgcacagtcttgaaaaattggcaccatttggcatggacaatccaaaacca
gtctttgaaattaaagattttgtggtgaaacaagcacgcaccatgggacaaaatggtgcg
catttaaaattaaaaattgcccaaggcacaacggcaattgaccttgttgcctttaatcaa
ggacatctagcgcaggaatttcaacaagcgcaaaatctttgccttgcaacgaccttatcg
attaataagtggaatgggcaaacgactgttcaattaatgttggaagatgcgcgtgttgag
ggtgttcagttgattgatattcgctccaaaacagctagccttccagaacgtgttccagta
ttggctgaagatagcacggcaaatgaagttgtggtgttagacattcctgataaggctgaa
gaattgaaatcactctttgtcggtcgtcattttgaagccgtttattttaaaaatcatatt
aaacgtgcttattatctgacaggctatggcacacgtgaccaatttgctaagctttataaa
actatctatcaattcccagaatttgatgtccgctacaagttgaaagatttgagtcaatac
cttaatatccctgatattttactcgttaaaatgattcagatttttgatgaattagatttt
gtaaccatcacagatggtgttatggtcgtcaacaaagatgcccagaaacgcagtatttca
gaaagccaaatctaccaagacctcaaacaacaagttaaattccaagagttaatggcactc
ggaaccccacaagaaatttacgattggctgactgatgaagatgactaa
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