Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069: SGGBAA2069_c14090
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Entry
SGGBAA2069_c14090 CDS
T01444
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
sgg
Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069
Pathway
sgg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sgg00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SGGBAA2069_c14090 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgg03021
]
SGGBAA2069_c14090 (rpoD)
Transcription machinery [BR:
sgg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SGGBAA2069_c14090 (rpoD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
WHD_DprA
DUF6494
DBD_HTH
Motif
Other DBs
NCBI-ProteinID:
CBZ48581
LinkDB
All DBs
Position
complement(1461746..1462855)
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AA seq
369 aa
AA seq
DB search
MAKEKEITTFNVQVAEFIRNHKKNGTAVDDEVTEKLVIPFSLDADQIDDLLERLTDGGIS
ITDKEGNPSTKYVVEEPKPEELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLTSEEEKEL
AVAVAAGDLQAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIA
ERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQL
DEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRS
KQLRDFIED
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaaaagaaattacaacctttaatgttcaagttgcagaatttattcgtaat
cacaaaaagaacggcactgccgttgatgatgaagtaactgaaaaattagttattccattt
tcattagatgccgatcaaatagatgaccttttggaacgtttgacagatggtggtatttca
attacggacaaagaaggaaatccatcaacaaaatacgtcgttgaagaaccaaaaccagaa
gaattgacagacgaagaattgcttggtagtaattctgccaaggttaatgacccagtgcgt
atgtatctcaaagagatcggtgtcgtgccattgctcactagcgaggaagaaaaagaattg
gctgttgccgttgctgctggtgaccttcaagcaaaacaacgtttggctgaagctaacttg
cgtttggttgtttcaattgcaaaacgttatgttggacgtggtatgcaatttcttgacctt
attcaagaaggaaacatgggcttgatgaaagctgttgataaatttgactactcaaaaggg
ttcaaattctcaacttatgcgacatggtggattcgtcaagctatcacacgtgctattgct
gatcaagctcgtacgattcgtattcctgttcacatggttgaaaccattaataaacttgtt
cgtgaacaacgtaacctccttcaagaacttggacaagacccaacgcctgaacaaattgca
gagcgtatggatatgacgcctgacaaagttcgtgaaattttgaaaatcgctcaagaacct
gtttcattggaaacaccaatcggtgaagaagatgacagtcaccttggtgatttcattgaa
gatgaagttattgaaaacccagtagattacacaactcgtgtcgtacttcgtgaacaattg
gacgaagttttggatacgttgacagaccgtgaagaaaatgtgttacgtttgcgttttggt
cttgatgatggtaaaatgcgtacattagaagatgttggtaaagttttcaatgtgacgcgt
gaacgtattcgtcaaattgaagccaaagctcttcgtaaactacgccacccaagccgtagt
aaacaactccgtgattttatcgaagattaa
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integrated database retrieval system
