Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069: SGGBAA2069_c18980
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Entry
SGGBAA2069_c18980 CDS
T01444
Symbol
rnhC
Name
(GenBank) Ribonuclease HIII
KO
K03471
ribonuclease HIII [EC:
3.1.26.4
]
Organism
sgg
Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069
Pathway
sgg03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
sgg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SGGBAA2069_c18980 (rnhC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgg03032
]
SGGBAA2069_c18980 (rnhC)
Enzymes [BR:
sgg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
SGGBAA2069_c18980 (rnhC)
DNA replication proteins [BR:
sgg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
SGGBAA2069_c18980 (rnhC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
DUF3378
TBP
DUF4056
PXA
Motif
Other DBs
NCBI-ProteinID:
CBZ49070
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All DBs
Position
1953221..1954123
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AA seq
300 aa
AA seq
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MNTIVMKMGKDDLQNLIKALTSQQVNNNNPYVTFAAKVKGVTVLVYTSGKVVFQGANAET
IAEQFGYQSASESTSDTVSGQNMPLIGSDEVGNGSYFGGLAVVASFVTPDDHALLKKLGV
DDSKNLTDSKIRQIAPVLENNIKHKALLLSPQKYNQVVGKGKMHNAVSVKVALHNQAIYL
LLQDGVKPEKIVIDAFTSRQNYQKYLKNEANQFANPLTLEEKAEGKYLAVAVSSIIARNL
FLENLDKLSQEVQYKLPSGAGSQSDKVASQILAAYGMSGLEHTAKLHFANTQKAQALLKK
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaataccattgttatgaaaatgggtaaagatgatttgcaaaatctgataaaggcacta
actagccagcaagtcaacaataacaatccctatgtcacttttgcggcaaaagtaaagggt
gttacggttcttgtttacacatctggcaaagtcgtctttcagggcgcaaatgcggaaact
atcgctgaacaatttggctatcaatcagctagcgagtcaacaagtgacaccgttagtggt
cagaatatgccccttatcggatcagatgaggttggtaatgggtcttattttggtggactg
gctgttgttgctagttttgtgacccctgatgaccatgccctgcttaaaaagcttggagta
gatgattccaagaacttaacagatagcaaaatccgtcaaatcgccccagtcttagaaaac
aatatcaagcataaagctctgctattgtccccacagaaatacaaccaagtcgttggtaaa
ggaaaaatgcacaacgccgtctctgtcaaggtagctcttcacaatcaagcgatttatctg
cttctccaagacggtgtcaagcctgaaaaaattgttatcgatgcttttaccagtcggcaa
aattatcaaaaataccttaaaaatgaagccaatcaatttgctaatccgctgacactcgaa
gaaaaagccgaaggaaaatatttggcagttgccgtcagttcaatcatcgctcgcaacctt
ttcttagaaaatctcgacaaacttagccaagaggtgcaatacaaactcccaagcggtgct
ggtagccagtcagataaagtcgcgagtcaaattttagcagcctatggcatgtctggctta
gaacatactgccaagcttcattttgcaaatacccaaaaagcgcaagcattattaaaaaaa
taa
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