Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069: SGGBAA2069_c19420
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Entry
SGGBAA2069_c19420 CDS
T01444
Name
(GenBank) metallo-beta-lactamase superfamily protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sgg
Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069
Pathway
sgg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SGGBAA2069_c19420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgg03019
]
SGGBAA2069_c19420
Messenger RNA biogenesis [BR:
sgg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SGGBAA2069_c19420
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
SIS_2
Motif
Other DBs
NCBI-ProteinID:
CBZ49114
LinkDB
All DBs
Position
1991330..1993012
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AA seq
560 aa
AA seq
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MSQINLKPEEVGVYAIGGLGEIGKNTYGIEYKDEIIIVDAGIKFPEDDLLGIDYVIPDYS
YIVENIDRIKGLVITHGHEDHIGGIPFLLKQANIPIYAGPLALALIKGKLEEHGLLRDAK
LYEINANTELTFKNLSVTFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDWTPVGEPADI
HRMAALGEDGVLCLLSDSTNAEIPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRL
QQAAEAAVKTGRKIVVFGRSMEKAIVNGIELGYIKVPKGTFIEPSELKDYHASEILIMCT
GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVEVIHG
KVNNIHTSGHGGQQEQKLMLRLMKPKYFMPVHGEYRMLKIHAGLAMDTGVPKDNIFIMEN
GDVLALTANSARRAGHFNAQDIYVDGNGIGDIGAAVLRDRHDLSEDGVVLAVATVDFDTQ
MILAGPDILSRGFIYMRESGDLIRESQRVLFNAIRIALKNKDASIQSVNGAIVNALRPFL
YEKTEREPIIIPMILTPDEK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaatcaatttaaaacccgaagaagttggggtttacgcaattggtggtcttgga
gaaatcggaaaaaatacttacggtattgagtacaaagatgaaattatcatcgttgatgct
ggtatcaaattccctgaagatgaccttctcggaattgattatgtcattccagattattct
tatatcgttgaaaatattgaccgtatcaaagggctcgttattacccacggtcatgaggac
cacattggtggaatcccatttctcttaaaacaagctaatatcccaatctacgctggacca
ttagctcttgcacttatcaaaggaaaattggaagaacacggacttctccgtgatgctaaa
ctctatgaaattaatgctaacacagaattaacatttaaaaaccttagtgttactttcttc
cgcacaacccactcaattccagaacctcttggaatcgttatccacacaccacaaggtaaa
attgtctgcacaggggacttcaaatttgactggacaccagttggtgagccagcagatatc
caccgcatggctgcccttggtgaagatggcgttctctgtttattatcagactcaaccaac
gctgaaattccaacctttacaaattcagaaaaagtcgttggacaatctatcatgaagatt
attgaaggcattcatggacgtattattttcgcgtcatttgcttcaaatatcttccgtctc
caacaagctgccgaagctgccgttaaaacaggacgtaaaatcgttgttttcggacgttct
atggaaaaagccattgtcaacggtattgaacttggttatatcaaggttccaaaaggaaca
tttatcgaaccaagtgaactcaaagactatcacgctagtgaaatcttaatcatgtgtaca
ggtagtcaaggagaatcaatggctgcactagcacgtattgccaatggtacacaccgccaa
gtcacactacaacctggcgacaccgttatcttctcatctagcccaattcctggtaacaca
acaagtgttaataaacttatcaacactatccaagaagctggtgtcgaagttatccacggt
aaagtcaataatatccacacatctggtcacggtggtcaacaagagcaaaaactcatgctc
cgcttgatgaaaccaaaatacttcatgccagttcatggtgaataccgtatgttgaagatt
catgctggtttagcaatggacacaggtgtgccaaaagataatatctttatcatggaaaac
ggtgatgtcctagctcttacagctaattcagctcgccgtgctggacacttcaatgctcaa
gatatttatgttgatggtaatggtattggagatattggtgctgccgtactgcgcgaccgt
cacgatttatcagaagacggtgtcgttcttgctgtcgcaactgtcgattttgacacacaa
atgattttagcaggtcctgacattctcagccgtggatttatctacatgcgcgaatcgggc
gacctcatccgtgaaagtcaacgtgttcttttcaacgcgattcgcattgccttgaaaaac
aaggacgcaagtattcaatctgttaacggtgctatcgttaacgcacttcgtccattcttg
tacgaaaaaacagaacgtgaaccaatcattatcccaatgattctcacaccagatgaaaaa
tag
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