Sinocyclocheilus grahami (golden-line barbel): 107548298
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Entry
107548298 CDS
T04918
Name
(RefSeq) uncharacterized protein LOC107548298
KO
K12597
protein AIR1/2
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107548298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107548298
03016 Transfer RNA biogenesis [BR:
sgh03016
]
107548298
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
107548298
Transfer RNA biogenesis [BR:
sgh03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
107548298
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_3
Zn_ribbon_2
Motif
Other DBs
NCBI-GeneID:
107548298
NCBI-ProteinID:
XP_016084417
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MPPPTPVKMLAMQSNEPRYAEARFPAADHEIEVFFGAWLIAVQGHQARDRCCQEPDSSAH
PRSPEPRGRNAFEEGDSSRRVEAASRVGSDDLDPLRKSGGGSVRHERECALPAVLLPVSL
PAGRGRSDIALVSSQAISVCPVRALRIFIDRSASFRQSDQLFVCYGGCAKCLAVSKRRLF
HWVVDTNTAVIRAKVWNVLCTLGPTQQELSPPPGRGQETTNGPLCKASDPEACRKPAYCY
NCSKKGHFGHECTEKRMYNGTYPTLPFLSRYDTKNDFHYREIRVKKQARELKQAGLISPD
RAVITYTPQPPRKKQKNSHKQSPYPYNTHTNNQNTPKRRIAHTPKHTYFNVKQNSETPGN
HGKHTPKSKFKPQDQSQNEAKKKKKKTQSEVVLDEDADFRRGCKKSPHKTRDVSSPRKAN
VKPNKPFGMEKNNKKDKLSKKKERKWQKRERKAAKDSSMYPSDENLFQIKQRKHPSSTTN
GMTLGAGLSVWPTNGRCGSGN
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgcccacaccggttaaaatgctcgccatgcaaagcaatgagcctcgttatgcc
gaggcgcgctttccagcagcagaccacgagatcgaggtcttctttggcgcatggctcatt
gcagtgcagggacaccaggcccgcgaccgctgctgccaggaaccggatagcagcgcacat
ccccggtctcctgaaccgcggggcagaaatgcttttgaggaaggggattcctcaaggaga
gtggaggctgcatcccgagtcggttcggatgatttggacccgctgcggaagagcggaggt
ggatctgttcgccacgagcgagaatgcgcactgcccgctgttcttctccctgtctcactc
ccggctggaaggggacgctctgacatcgcactggttagcagccaggctatttcggtgtgc
cccgtcagggctttgaggattttcattgaccgttcggccagctttcggcaatctgaccag
cttttcgtgtgctacggtggttgtgcgaagtgcctggccgtgtcaaaaaggaggcttttc
cactgggttgtggacactaacacggctgttatacgagccaaggtttggaatgtcctttgc
acattagggcccactcaacaagagctatcgccgcctcctggtcgtggtcaagagaccact
aatggacccctctgcaaagccagtgatccagaggcctgcaggaaacctgcctactgttat
aactgctctaagaaaggacacttcggccatgaatgcaccgagaagagaatgtataatggg
acatatcccaccctgccatttctttcccgttacgacacaaagaatgacttccattaccgg
gaaattcgagttaaaaagcaggccagagaacttaagcaagctggattgatttcacctgac
agagctgtcattacatataccccccaaccacccaggaagaaacaaaaaaacagccacaaa
cagtctccatacccatacaacactcacaccaacaaccagaacacgccgaagagacgcatc
gcgcacacacccaaacacacatacttcaacgtcaagcagaactcagaaacgccagggaac
cacggcaaacacacccctaagagcaagtttaaaccgcaagatcaaagccagaatgaagcc
aaaaagaagaaaaagaaaacacaatctgaagttgttttagatgaagatgcagactttcgt
agaggttgcaaaaagagccctcacaagacaagagacgtttcatcacctcggaaagccaat
gtgaagccgaataagccctttggaatggaaaagaacaataaaaaggacaaactatcgaaa
aagaaggagaggaagtggcaaaagagagaacgaaaagctgcaaaagattcttccatgtat
ccttccgatgaaaacctttttcagattaagcaaagaaagcatccctccagcacaaccaat
ggcatgacgttgggggcggggctatcagtttggccaaccaatggcagatgtgggagtgga
aactag
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