Sinocyclocheilus grahami (golden-line barbel): 107548328
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Entry
107548328 CDS
T04918
Name
(RefSeq) transcription factor EB-like
KO
K15590
transcription factor EB
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04020
Calcium signaling pathway
sgh04137
Mitophagy - animal
sgh04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
107548328
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
107548328
04137 Mitophagy - animal
107548328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107548328
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
107548328
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
DUF8092
Motif
Other DBs
NCBI-GeneID:
107548328
NCBI-ProteinID:
XP_016084489
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MSSRIGLRLQLMRDQLQQEEQRERERERQQQQAASMHYMQHRMPGPPAPSPAISAPTHFQ
APMQVPVEVLKVQTHLENPTDYHIRQSQRQQVKEYLSTTYATKQAVHAVTSLVQPSPSTM
PQGQTGIVPSTMPSPCMRTEQLMTSAGNSAPNSPMAMLNIGSSHENEMDEVIDDIISLRS
SYDDIQAYIDPVVQMPNTLPLSSSHLDVYTGPGMSGSAIAMTSNSCPANLAIKRELSEAR
AMAKERQKKDNHNQIERRRRFNINDRIKELGTMIPKTNDLDVRWNKGTILRASVEYIKRM
QKDIHRTREVENNFRRMEMANKQLWLRIQELERQAQMHGLPSSSPSGLNNIEVLNPFVKQ
ENSPEENHLSHQPHLPPHYPHHQQHQGQPQPQPHTQLHLHQHLHPQPALQYPAVGSSQHF
DYAQSLDLCDGGIPGYQDGMGGIGDLVSLGGGVVPMGKKSELDFLLMEEALSPLGGDPLL
SAMSPEASVDSSRRSSFSIEDSDIL
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcacgtatcggcttgcgcctgcagctcatgcgggaccaactgcagcaggaggag
cagcgggagcgggagcgggagcggcagcagcaacaggcagcatccatgcattacatgcag
caccgcatgccaggcccaccagcgccctcgccagccatcagtgcaccaacacacttccag
gcacccatgcaggtgcccgttgaagtgttaaaggtgcagacccatcttgagaaccccacg
gactaccacattcgacagtctcagcggcagcaagtcaaggagtacctgtccaccacatac
gccaccaagcaggctgtacatgcagtcacaagtttggtacagccctctccatccaccatg
ccccagggtcagacaggaatcgtcccatcaaccatgccctctccatgcatgcgcaccgag
cagctcatgacctctgctgggaacagtgcacccaacagtcccatggccatgctcaacatc
ggctccagccatgagaatgagatggatgaggttattgatgacatcatcagcctgcggtcc
agttatgatgacatccaggcttatattgaccctgtggtccagatgccaaacacacttcca
ctgtccagcagccatttggatgtgtacacggggccaggtatgtccggatcagctatcgcc
atgaccagcaactcctgccctgccaacttggccatcaagagagagctgtcagaagctcgt
gcaatggctaaagagaggcagaagaaagacaaccacaaccagattgaaaggaggagaagg
tttaacatcaatgatcgaattaaggagctgggcaccatgatccccaaaaccaatgacctg
gatgtgcgctggaataaaggcactattctgagggcctctgtggaatatattaaacgcatg
cagaaggacatccatagaaccagagaggtggagaacaacttcaggaggatggaaatggcc
aacaaacagctgtggctccgcattcaggagcttgagaggcaggcccagatgcatggccta
cccagcagctctccatccggtcttaacaacattgaggttctaaaccccttcgtcaagcag
gagaacagccctgaggagaaccacctctcacatcagccccatctccctcctcactaccct
catcatcagcagcaccagggtcagccgcagccccagccccacactcagctccacctgcac
cagcaccttcacccccaacccgcactacagtacccagccgtgggcagctcccagcacttt
gactatgcccagtcgctagacttatgtgatggtggcatcccaggatatcaggatggcatg
gggggcattggggatctcgtctcgttgggcggaggtgtcgtgccaatgggaaagaagagt
gagctggacttcttgctgatggaagaggccctgtcaccgctaggaggagacccactgctg
tctgccatgtcccccgaggcttctgtggacagcagccgccgtagcagcttcagcatagag
gactcagacatactgtga
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