Sinocyclocheilus grahami (golden-line barbel): 107548546
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Entry
107548546 CDS
T04918
Name
(RefSeq) Fanconi anemia group J protein-like
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03440
Homologous recombination
sgh03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107548546
03460 Fanconi anemia pathway
107548546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgh03400
]
107548546
Enzymes [BR:
sgh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
107548546
DNA repair and recombination proteins [BR:
sgh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
107548546
FA (Fanconi anemia) pathway
Downstream FA components
107548546
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
ARCH_RTEL1
Motif
Other DBs
NCBI-GeneID:
107548546
NCBI-ProteinID:
XP_016084750
LinkDB
All DBs
Position
Unknown
AA seq
1150 aa
AA seq
DB search
MAAAPVEYTIGGVKINFPCKAYPSQLAMMNSIIRGLNNGQHCLLESPTGSGKSLALLCSA
LAWQQAQFGKEQDACSSSADCKKPAVATPCQCVCHNRNAHPTSSSTASKPPLVDLPCEGT
SAQAPTPLSKEVNSDQSKKSTLSSRLSEKLQASLSNGEQDDDFKIDRKRIRTPSTEQKSS
KRRCLERGVIYIDDDEEAAHLERLVPGAQSWTMELNSGARADSCQSQPQCCSHVSCSLCP
CANLKAGQKTVEKSKDSDKDKEGSGRKKIPKIFFGTRTHKQITQIARELKRTLYSTVPMT
ILSSRGHTCVHPEVVPHANRSERCKELLEAKNGLSCRYYHNVHKMRDQSTLQWVHGLHQA
WDIEDLVRLGGKLRSCAYYAARELMQDACIVFCPYNYLLDPLIRESMEINLKEQIVVLDE
AHNIEDCARESASYTLNQAQLLLARDEMDGMVTHNIRRDQHRPLLAFCCSLANWVQESCN
SLEEREYESSCKVWTGAEILGIFHGLGITADTFSLLQKNLAAVLEKEERIGLVNGREDVV
QVPTISSNTQSMLKSLFMVLEFLFRQNCRFADDYRVALQQSYMWTTQQDLPDAQGFFARP
QRRRQSTRTKTLVHTLSFWCLNPAVAFSDLSGSVRSDNASLPQSSEDMLDKLRDRWMNTG
LWDKFEERKTVITEPRGGGKGDFDELLQTYYEAIRGTAANGENRDGALLVAVCRGKVSEG
LDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDKHAKSRGLLPGGRWYEIQAYRALNQA
LGRCIRHRNDWGALILVDDRFRTNPNKYITGLSKWVRQLVRHHDTFTGAMQSLESFSQSQ
RGAVETFEETQSQAAPQHPSPSTITSPPPEIITPLKPFDHRLAPPNLHTEVRAANSESRS
SESGDKKNMQHPSEPSREHNVQRTPWPTSHLFTSTPVSSQFKTPIFQSEPDASSVINKQV
QHEVISVAPKHQINVVPDLNDSSVDPQLEQVFVIPASTSKDTTTGMDHKDTEVDEQSIFY
SPELFEGDEEEKEETTEKSFPEVSHPLANSTASVLLEDLFGSEEGKRTLSEDLVSSAVPD
DTLLQGSTEQRDLNCGTDIGSQNGASSSRLRRLSRCRQKRPNTSAASGKLTNYFKHVPPT
SQPCIIIIDD
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggctccagtggagtacaccatcggaggggtgaaaataaacttcccctgcaaa
gcttatccctctcagctggccatgatgaactcaatcattcgtggacttaacaatgggcag
cactgtctgttggagagccctactggcagtgggaagagtcttgctttgctttgttcagcg
ctcgcatggcagcaagcacagtttggtaaagaacaggatgcatgttctagttcagctgac
tgtaagaaaccagcagtggctactccatgtcagtgtgtgtgccataatcgaaatgcacac
cccacttccagcagcacagcatctaaaccacctctggttgatcttccttgtgaaggtact
tctgctcaagctccaacccctctctcaaaagaagtcaatagtgaccagtctaagaagtcc
actttgtcttcccgtctctctgagaaacttcaggcctctctctccaatggagaacaagat
gatgattttaagattgacaggaagcgcattcgtacaccaagcacagagcagaagagcagc
aagcgaagatgtctcgagcgaggagtgatttacattgatgatgatgaagaggcggcgcat
ctggagagactggtgcccggggctcagagttggaccatggaattgaacagtggtgccaga
gctgacagctgccaatcgcagccacagtgttgttctcacgtgtcttgttcactctgtcct
tgcgccaacctcaaagcaggacagaaaacggttgaaaagtccaaggacagtgataaagac
aaagagggaagcggaaggaaaaagatcccaaagatcttctttggcactcgtactcataag
cagatcacacagatcgcacgggagctcaaacggacactttactccaccgtgcccatgacg
atactgtccagccgaggacatacctgtgttcatcctgaagtggtgcctcatgccaaccgc
agcgagcgctgcaaagagctgctggaggccaagaacggtctgtcatgtcggtactaccac
aatgtgcataaaatgcgtgatcagagcactttacagtgggttcatgggctacatcaggcc
tgggacattgaggatctggtccgtcttggcggtaagctgcggtcctgtgcttactacgca
gctcgggagctcatgcaagatgcttgcatcgtgttctgtccttacaactacctgctggac
cccctcattcgtgaaagtatggaaatcaatctgaaggagcagattgtggtgctggatgag
gctcataacattgaggactgtgcccgtgagagtgccagttacacactgaaccaagctcag
ctgttgctggcgcgggatgagatggatggaatggtgacacacaacattcggcgcgatcaa
cacaggcctctgctagccttctgctgcagccttgccaattgggtgcaggaaagctgcaat
agcttagaggagcgtgaatatgagtcttcctgtaaggtctggacaggagccgagattctt
ggcatctttcatggccttggcatcacagcagacaccttctctttgctacagaaaaacctg
gcagcagtgctggagaaggaggagcggattgggctagtgaacgggagagaagacgtggtg
caggttcccaccatcagctccaacactcagtcaatgctcaaaagcctctttatggtgctg
gaatttcttttcagacaaaattgcaggtttgcagatgattaccgtgtggccctccagcag
agctacatgtggaccacccagcaggacctgcctgacgctcagggctttttcgcacgaccc
cagcgtcgccgacagagcacccgcaccaaaactctggtgcacaccctgagcttttggtgc
ctcaaccctgctgtggcattttcagatctgagcggctcagtacggagtgataatgctagt
ttgccacagagttctgaagatatgttagataaactgagggaccgctggatgaacacaggt
ctgtgggacaagtttgaggagcggaagactgtaattactgagccacgtggtggtggcaag
ggtgattttgatgagttgctgcagacatactacgaggccatcagaggaacagcagccaat
ggtgaaaacagagatggagcactgctggttgcggtttgcagagggaaggttagcgagggc
ttagacttcaccgatgataatgccagagcagtggtcactattggtatcccattccccaat
atcaaagacttgcaggttgaactgaagatgaaatacaatgacaagcatgccaagtcacga
gggcttctgcctggtgggcgctggtacgagattcaagcatatcgggcactaaaccaggca
ctcggaaggtgtatacgacatcgaaatgactggggggcacttatactggtcgatgaccgg
tttaggacaaacccaaacaaatacatcacaggcctgtcaaagtgggtgcgtcagctagtg
aggcaccatgacaccttcactggcgccatgcagtccctggagtccttttctcaaagccag
cggggggcagtagagacctttgaagagacacaatctcaagctgcccctcaacaccccagc
ccttccactattacctcaccccctcccgagataatcacccccctcaagccatttgaccat
aggcttgcaccgccgaacctacacaccgaggtgcgggcggccaactctgagagcaggtct
tctgaatcaggtgacaaaaagaatatgcagcatccatctgaaccaagcagagaacataat
gtccaaagaacaccatggcctacaagccacctcttcacttccactccagtcagtagccaa
ttcaagactcctatttttcaatccgagccagatgcgagttcagtgatcaacaagcaagtt
cagcatgaagttatttctgttgcaccaaagcaccaaataaatgtggttcctgacctaaat
gacagttcagttgatcctcaacttgagcaggtctttgtgatccctgcctctacttcaaag
gataccaccactggaatggaccataaggatactgaagtggatgaacaaagtatcttctac
agccctgagctttttgaaggagatgaggaggagaaggaagagactactgagaaatctttt
ccagaagtcagccatcctctcgctaatagcacagccagtgttcttttagaggacctcttt
ggttcagaggaaggaaagaggacattgtctgaagaccttgtgagcagcgctgtcccagac
gacacattgttacagggtagtacagagcagagagatttaaactgcgggacagatattggc
tcacaaaatggtgccagcagtagtcgattacgtagactctccagatgtaggcagaaaagg
cccaacacatcagcagcatcaggtaaactcaccaactattttaaacacgtgcccccaact
agccaaccgtgcataattataattgatgactga
DBGET
integrated database retrieval system
