Sinocyclocheilus grahami (golden-line barbel): 107548618
Help
Entry
107548618 CDS
T04918
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04137
Mitophagy - animal
sgh04140
Autophagy - animal
sgh04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107548618
04137 Mitophagy - animal
107548618
04148 Efferocytosis
107548618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107548618
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
107548618
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
HIF-1a_CTAD
PAS_3
PAS
HIF-1
PAS_9
PAS_4
HLH
Hl_ALG44
Motif
Other DBs
NCBI-GeneID:
107548618
NCBI-ProteinID:
XP_016084863
UniProt:
A0A672RH49
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MDYICVCVHYRVSSERRKEKSRDAARCRRGKESEVFYELARELPLPHSVTSNLDKASVMR
LALSYLRLRKLLNTDVLDVESELDSQWNSSYLKALDGFLMVLSADGDIVYLPESVSKCLG
LPQIDLTGYSVFEYTHPCDHEELREMLAHRTGLSKKAKEQHTNRSFLLRMKCTLTSRGRT
VNVKSASWKVLRCSGHIHTTDGIKKGVCEEKNVCSAYLVLICESIPHPANIEAPLDSRTF
LSRHTLDMRFTYCDERITELLGFDPVDLLHHSVYEYYHALDSDHMTKAHHNLFVKGQVCT
GQYRLLAKAGGFAWAETQATVIYNSKNSQPQCVVCVNYILSGIEQPKQILSLQQTNSTKL
KQEREEHHEESLGTEVTVAELKEEAKTKDEKKEECVREELHDSLKGKPEALTVVDPVLAL
DITSTDSVISVLTEIPLYNDVMLPSSSALLPLSPLSPPYSSLNYDDASTAHLQPDDFPFP
QSLAPDSSRSQVDLLVDSELSDQLKPDHVERLFSMDIEAKTPFNTQGVGLDLELLAPYIP
MDDDFQLRTVSPAESMCSSPGSVLELTPSSSTQTAPALPAAPLDLVSCDTVPQNIRTTKQ
GNSREIIQDSDISSKCQTNPKLLKRKLETIPLSEAIRLGSVLQVVNDFPEKRIRKSDASS
SEGLPHATILLLPSDVASRLLSRSEGGAIMMPLPQLTRYDCEVNAPVTGRQHLLQGEELL
CALDLLI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggattatatttgtgtatgtgttcattatagggtgagttcagagcgaaggaaggagaaa
tccagagatgcggcgcgttgtcggagaggaaaagagtcagaggtgttttatgaactggcc
agagaactgcccctcccccacagtgtcacctctaacctggataaagcatcggtcatgaga
ctcgcactcagttacctgcgcctgcgtaaactactgaacacagatgtactggacgtggag
tctgaattagactctcagtggaacagttcatatctcaaagctctggacgggtttctcatg
gttctttctgctgatggcgacatcgtctacctgccagagagtgtcagcaagtgtctgggc
cttcctcagatcgaccttactggatacagtgtgtttgagtatactcatccatgtgaccat
gaggagctcagagaaatgctggcacacaggactggtctgtctaagaaagcaaaggagcag
cacacaaacagaagttttctgttgaggatgaaatgtacactgacaagcagagggcgcact
gtcaatgtcaaatctgcctcctggaaggtgctgcgctgttcgggccatatccacacaaca
gatggcatcaagaagggtgtgtgtgaggaaaaaaatgtgtgttcagcgtacctggtgctc
atctgtgagtctattccccacccggcgaacattgaggctcctctggattctagaacattt
ctcagccgccacactttagatatgcgcttcacctattgcgatgagaggatcacagagctg
ttgggttttgatccagtggatctgttgcaccattctgtgtatgaatactatcacgcgctg
gattctgaccacatgaccaaagcacaccacaacttgtttgtgaagggacaagtatgtact
ggacagtaccggctgctggctaaagcaggagggtttgcttgggcagagactcaagccact
gtgatctataacagtaaaaactcccagccacagtgtgtggtctgtgttaactacatcctc
agtggcattgaacagcccaaacaaatcctgtcccttcaacaaaccaacagcacaaaatta
aaacaggaacgggaagaacaccatgaggagtcactcgggactgaagtgactgtggcagag
ttgaaagaggaggcaaagacaaaggatgagaagaaagaagagtgcgtgagagaggagcta
cacgatagcctgaaggggaagccagaggcactgactgtagtagaccctgtcctcgcactg
gatatcaccagcacagactctgtaatctctgtgttgacagaaattcctctctacaatgat
gttatgttgccctcttcaagtgccctgctacccctctcacccctctctcctccctactcc
tccctaaattatgatgatgcctccacagcccatctacaacctgacgacttccccttccca
caatctttggctcctgattcttccagatcccaggttgatctccttgtggattcagaatta
agtgaccagctaaaaccggatcatgtggaaagactattttccatggatatagaggccaaa
acaccctttaatacacagggagtgggtttggacctggagttgttagctccatacattccc
atggatgatgatttccagctgcggactgtttctccagctgagtcgatgtgttccagccca
ggttcagtgcttgaactgaccccctccagcagcacacaaactgcccctgctctcccagca
gcccctctagacttagtgtcctgtgacaccgttccacagaacattagaaccacaaagcag
ggcaacagcagagaaattattcaagacagcgatatttcttctaaatgtcagacaaaccca
aagctactcaagaggaaactggagaccatacctttgtctgaagcaataaggctgggttct
gtgctgcaggtggtgaatgattttccagagaaaaggatcagaaaatcagatgcttcatca
tcagaagggcttcctcatgccacgatactgttgctgccatctgatgttgcgagtaggtta
ttgagcagatcagagggtggagccataatgatgcccctcccccagcttacccgttacgac
tgtgaggtaaatgcacctgtgactgggcggcagcacctgctacagggggaggagctattg
tgtgccttggacttacttatttaa
DBGET
integrated database retrieval system
