Sinocyclocheilus grahami (golden-line barbel): 107548622
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Entry
107548622 CDS
T04918
Name
(RefSeq) CDK-activating kinase assembly factor MAT1-like
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03022
Basal transcription factors
sgh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107548622
09124 Replication and repair
03420 Nucleotide excision repair
107548622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgh03021
]
107548622
03400 DNA repair and recombination proteins [BR:
sgh03400
]
107548622
Transcription machinery [BR:
sgh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107548622
DNA repair and recombination proteins [BR:
sgh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107548622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAT1
DUF604
TRAF6_Z2
Motif
Other DBs
NCBI-GeneID:
107548622
NCBI-ProteinID:
XP_016084870
LinkDB
All DBs
Position
Unknown
AA seq
273 aa
AA seq
DB search
MLFVRGSGNCVQCNTPLRKSNFRVQLFEDPAIDKEVEIRKKVLKIYNKREFDFSTLKEYN
DYLEQVEDIVFNLTNNIDVERTKQMMEQYQRDNKDIIQRNKAKLTREQEELEELLLQDHQ
DSEQRRLETLQEEQRHLQAKRINKQALLDELEISKLPAAVLLAQHKDRASQLETQIEKQK
QNVKPANIFSTGIMMGQTVSLASVSRVEEVLYVYQLLCIDTYGPPVLELDQLGRLGYLNH
VRTASPQDQAGGYTSGLACHRAIQDAFSGLFPS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttgtccgtggttcaggtaactgtgtgcagtgcaacactcctctcagaaagagt
aatttccgcgtgcagctcttcgaagatccagccatcgataaagaggtggagatccgcaag
aaggttcttaaaatctataataagagggaatttgatttttccactctgaaagaatataat
gactacctggagcaggttgaggacattgtgtttaacctgacaaataacatagatgttgaa
aggaccaagcagatgatggaacagtaccaacgagataacaaagacattatacagagaaac
aaagccaaactgacacgtgagcaggaggagttggaggagctgttgttgcaggatcatcag
gattcagagcagaggagactggagacccttcaggaggaacagagacatctacaggctaag
aggataaacaagcaggccctgctggatgaactggaaatttccaagttacctgcggctgtg
ctgttggcccaacataaagatcgagcctctcaactggagacccagatagaaaaacagaag
caaaatgtcaagccagcaaacatcttctctactggaataatgatgggtcagactgtgtct
ttggcttctgtgtctcgtgtggaggaggtgttgtacgtctatcagcttctgtgcattgac
acatacgggccgcccgttctggaactggatcagttgggccgattagggtatttgaatcat
gtgcgcacagcatctccacaggatcaggctggtggttatacatcaggactggcatgccat
cgtgccatccaggatgctttcagtggcctcttcccctcatga
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