Sinocyclocheilus grahami (golden-line barbel): 107548771
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Entry
107548771 CDS
T04918
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010
MAPK signaling pathway
sgh04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107548771
04020 Calcium signaling pathway
107548771
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107548771
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107548771
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
EGF_Hmr-1
Motif
Other DBs
NCBI-GeneID:
107548771
NCBI-ProteinID:
XP_016085063
LinkDB
All DBs
Position
Unknown
AA seq
2145 aa
AA seq
DB search
MSRMARFGDDLPTRYGGTAGAGRGGARAGGPSGGQRMYKQSMAQRARTMALYNPKQTKQN
CFTVNRSLFIFSEDNAIRKYAKRITEWPPFEYLILTTIIANCIVLALEQHLPAMDKTPMS
ERLDDTEPYFIGIFCFEAGIKIIALGFVFHKDSYLRNGWNVMDFVVVLTGILTTLGSQFD
LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGVEFYMG
KFHFTCFKVDTGEKVGDYPCGTERPARVCPNGTVCKEYWTGPNFGITNFDNILFAILTVF
QCITMEGWTDVLYHANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEK
RQEFLKLRRQQQIERELTGYLEWICKAEEVLLAEEDQNAEEKSSLDGAWYRWKPNNPVLK
RAKSRKGRNDLISAEEGEEHFTDISSVAPPGSPFARASLKSSKNDSSSYFRRKEKRIRFF
IRRMVKAQSFYWIVLCLVGLNTMCVAIVHYDQPEWLTKALYLAEFVFLGLFLTEMTLKMY
GLGPRNYFHSSFNCFDFGVIVGSIFEVVWAAIQPGASFGISVLRALRLLRIFKVTKYWNS
LRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDSFPAAIM
TVFQILTGEDWNAVMYHGIESQGGVRGGMFSSVYFIVLTLFGNYTLLNVFLAIAVDNLAN
AQELTKDEEQQEEAAKKSMALQKAMEVKEVSPMSAANISIAAFVKQNRDAISRRSSVCSV
NILPSLSKEQQRSLQKLSIWEQRTTQLRRHNLRNSSEALYNELEPEERLRVSSALHLRPD
MKTHHDRPLVVEHRDGTGDNSRTDTDGDTPDCQLSSSNPRKHHRCRGENGDAGEGRHHRN
HSRNGEHQDTLEHSSNQDGGHRNHHTAGSLEEGIGLEEREHRHHHSRRSREVNGNGNGTI
GNGGRGEGRIRGHREGEGENGERRRLWPLVKAQSTLNGEECRENGGKHRGRPTGTDSLAT
SPLQSPTEEKPEDKDNLKNSTRVGPTGVNIPVTITAPLGETTMIDLGLLLHPGSYFRDPW
NILDFIVVTGALVAFACSSFMGSQQSVTRGTKGKDINTIKSLRVLRVLRPLKTIKRLPKL
KSVFDCVVNSLKNVLNILIVYVLFMFIFAVIAVQLFKGKFFHCTDESKALEKDCRGQFLE
YGSDGGAMTQPREWKKYDFHYDNVLWAFLTLFTVSTGEGWPTVLKHSVDATFEDQGPSPG
YRMETSIFYVVYFIVFPFFFVNIFVALIIITFQEQGDKAMSDCSLEKNEDKRINLSFLRL
FRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQFGLSPYVCLL
IAMLFFIYAIIGMQVFGNIMLSEESAINIHNNFQTFFQALMLLFRSATGEAWHEIMLSCL
SDRPCDRDSGYTGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDASILGP
HHLDEFIRVWAEYDPAACGRISYLDMYEMLRHMSPPLGLGKKCPPRIAYKRLVRMNMPIA
EDSTVHFTSTLMALIRTALEIKLASGVLAQRLCDAELRKEINKIWSNLSSKTVDLLVTPH
KHNELTVGKVYAALMIFDYYKQNRAKRLQQQQAAPGTQSKVGVLFRPMLPLTHLHNQEPL
VLKAPPSSQSDTAPQPDAPPTSFHLTNGDAVQSQSSAMKKSPSGGIPQEVTQEVNRRPVQ
WGQSEDVPNTYRSQELVEMTDMENDSDVGGYPVLEGHGRAASMPRLNAGFQRSHLRHTAG
TYLAPIADVSPMRRSMSSLTPQRGVREVNLSDYDLERPKMAPGQTLAQERERERAHHHHH
HHHHRCQRRKDKKHKSLDRAISEEQPPPAADPNTESPPRERSRERDRGRSHERKHHSSSA
AERKQRYYSCDRYGSHEQGHSVSTGPSRSTSPGEPHDPNRLKQGINTAKGSSVIHTSGTS
IPCRGRRQLPQTPLTPRPAVAYKTANSSPVQLNTAQSTGPCPTRLSRGLSEHDALLSGCT
HRQSPVPVTRIGSDPNLGPLQQDSNLSEADDFHDALSTYGMGRCPRTAASIAHTSSGAAP
TSTLLSRSQSGVPNGYHYSLGVNAAPGSSGRASGSYQETERNDWC
NT seq
6438 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggatggctcgctttggagacgatctgcccacccgctatggagggacagcgggc
gctgggagagggggagcccgggcaggaggtccctcgggcggtcaaagaatgtacaaacag
tcgatggctcagagagccaggacaatggctttatataatcctaaacaaaccaaacagaac
tgcttcactgtcaaccgctctttgttcatcttcagtgaggacaatgccatcaggaaatac
gccaaaagaataaccgaatggcctccatttgagtacctgatcctcactaccatcatcgcc
aactgcatcgtactggccctcgaacagcatctccctgccatggacaagacccccatgtct
gaacgcctggacgacacagagccctactttatcggaatattctgttttgaggccggcatt
aagatcatcgccttgggctttgtgtttcacaaagactcttacctacgcaacggctggaac
gtaatggactttgtggttgttctgacagggattttaaccacattgggttcccagtttgac
ttaaggacgttgcgggccgtcagagtgctgagacccctcaaactggtgtctggaatccca
agtcttcaagtagtattaaagtccattatgaaggccatggttccccttcttcagattgga
ctgctgctcttctttgccattgttatgtttgccatcatcggcgtcgagttctacatgggc
aaattccacttcacctgctttaaagtggatacaggtgaaaaagttggtgattacccatgt
ggaacagaacgtcccgcaagagtgtgtcccaatggaacagtatgcaaggagtactggaca
ggacccaacttcggcatcacaaatttcgataacatactctttgccatcctcacagtcttc
cagtgcatcaccatggaaggatggactgatgtactataccatgccaatgatgcctcggga
aacacctggaactggctgtacttcatccctctcatcatcatcggctccttcttcatgctt
aacctcgtcctgggtgtcttatcaggggagtttgccaaagaaagagagcgagtggagaag
aggcaggagttcttgaagctccgcagacagcagcagattgagagagagctcaccggatac
ctggagtggatatgcaaagcagaggaggtgttgctggcagaggaagatcagaatgctgag
gagaaatcctccctggatggtgcgtggtacaggtggaaaccgaacaacccagtcctgaaa
agagcgaagagcagaaagggtagaaatgacctcatcagtgctgaagagggagaggaacat
ttcacagacatctcctctgttgctccacctggatcacctttcgcccgagctagcctgaaa
agcagtaagaacgatagctcttcatatttccgtcgaaaagaaaagaggatacgctttttc
attcggcggatggtgaaggcacaaagtttctactggatcgttctgtgtttggtgggattg
aacacaatgtgtgtggccattgtccattacgaccagcctgagtggctcaccaaggccctg
tacctggcagagtttgtattcctgggtctgtttctgacagagatgactctgaagatgtat
ggcctggggcccagaaactactttcactcctcgttcaactgttttgactttggggtaatt
gtgggaagtatatttgaagtggtgtgggcagcgatccagcctggtgcatcttttgggatc
agtgttttgagagccctgcgcctgctccgtatttttaaagtaaccaagtattggaactct
ttgcggaatcttgtggtttcactgttgaactccatgaagtccatcattagcttgctcttc
ctcctcttcctcttcatcgtagtgtttgccctgctaggcatgcaactcttcgggggccag
tttaattttgaagatgaaactcccactacaaactttgacagcttccctgcagccataatg
acagtcttccagattttgacaggagaagactggaatgcagtgatgtatcatgggatagag
tcccagggtggtgtccggggtggaatgttctcttcggtctatttcattgttcttacactg
tttggaaactacacacttctcaatgtattcttggccatcgctgtggataaccttgccaat
gcacaggagctgacaaaggatgaagagcaacaagaggaggcagcgaagaagagcatggct
cttcagaaggccatggaggtgaaggaggtcagcccaatgtctgctgccaacatctcaata
gcagcttttgtaaagcaaaatcgagatgcaatctctcgcaggtcttcagtctgcagcgtg
aatattctcccgtccctcagtaaagagcagcagaggtcactgcagaagttgtccatatgg
gagcaacgcaccacccagctgcgtagacacaacctgcgcaacagcagcgaggccctttac
aatgaactagagcctgaagagcgtctacgcgtgtcttcagcgctccatctgcggcccgac
atgaagacccaccatgatcgtccacttgtagttgaacacagagacggcacaggggacaat
tccaggactgacacagatggagacactccagactgtcagctgtcctctagcaacccaagg
aagcaccatcgatgtcgaggagagaacggagatgctggagaggggaggcaccatagaaac
cacagccgaaacggagagcatcaggacaccctggagcacagcagcaatcaggatggagga
cacaggaaccaccacacggctggttctcttgaggagggcatagggttggaggagagagaa
cacagacaccaccattctcgccgatccagggaggtcaacgggaatggcaacggcacgatt
ggtaatggaggcagaggcgagggtaggatacgaggtcacagagagggcgaaggagagaat
ggagaaaggaggagactctggccacttgttaaagcccagtccacactgaatggagaagaa
tgcagggagaacggtgggaaacacaggggcagaccaacaggaacagacagcctagccacc
agccctctccagtctcctactgaagagaagccagaagacaaagataatctaaaaaacagc
accagagtgggcccaaccggagtcaacattcctgtcaccataactgccccactaggagag
actacaatgatcgatcttgggctgctgttgcatcctgggtcttacttcagggatccgtgg
aacatactggacttcattgtagtcaccggtgctctggtggccttcgcctgctcgagcttc
atgggatcgcagcaaagcgtgaccagaggaactaaaggcaaggacatcaacactatcaag
tccctgagggtccttcgagtcctgaggcctttgaagaccattaaacgtttgcctaaactc
aagtccgtgtttgattgcgtggtgaactctctgaagaatgtgctcaacatcctcatcgtt
tacgtcctcttcatgttcatctttgcggttattgctgtgcagcttttcaaggggaagttt
tttcactgcaccgatgagtccaaagccctggagaaggactgcaggggtcagttcctggag
tacggcagtgatggaggggccatgacacagccacgcgagtggaaaaagtatgatttccat
tatgacaacgtcctgtgggcctttctgaccctgttcactgtctctacaggagagggctgg
ccaacagtcctgaaacactctgttgatgccacatttgaagaccagggtcccagtccgggt
taccgcatggaaacctccatcttctacgtggtctacttcatcgtcttccccttcttcttt
gtcaacatctttgtggctttgatcatcatcacattccaggagcagggagataaggccatg
tcagattgcagcttggaaaagaacgaggataagaggattaatctgagtttcctgagactc
ttccgggccgctcgtctcattaaactcctccgtcagggctacaccattcgcatcctgctc
tggaccttcgttcagtcctttaaggctctaccgtatgtgtgtctcctcattgcaatgctc
ttcttcatatacgccatcatcgggatgcagtttggactttctccgtatgtgtgtctcctc
attgcaatgctcttcttcatatacgccatcatcgggatgcaggtgtttggtaacatcatg
ttgtctgaggagtcagctatcaacattcacaataacttccaaaccttttttcaggccctc
atgttgttgttcaggagtgctacaggggaggcttggcatgaaattatgctgtcttgtctg
agcgacaggccatgtgaccgtgactctggctatactggaaaagagtgcggcagtgatttc
gcttacttctactttgtctctttcatcttcctttgttccttcctgatgctgaatctgttc
gtcgccgtcatcatggataactttgagtacctgacacgtgacgcttctattctcgggcct
catcacctcgacgagttcatccgtgtctgggctgagtacgaccctgctgcctgtggacgc
atatcctacctcgatatgtatgagatgcttcgccacatgtcccctccgctaggtttggga
aagaaatgtcctccacgaatcgcctataagcggttggtgaggatgaacatgcccatagct
gaagacagtacggttcactttacctccactttaatggctctcatccggaccgccctggag
attaaactggcatcaggagttctggctcagcggctatgtgatgctgaattaaggaaggaa
ataaataaaatttggagtaacttgtcttcgaaaacagtagacctgctggtgacacctcat
aaacataatgaactgactgtagggaaggtctatgctgctctgatgattttcgactactat
aagcagaaccgagccaaaagactccaacagcagcaggctgcaccaggcacacagagtaaa
gttggtgttctcttcagaccaatgcttcctctcacacacttgcacaatcaggagccacta
gtgctgaaagccccgccctcttctcaatcagataccgcaccacagccagatgccccgccc
acatcctttcacctgaccaatggggatgcagtacaaagccagagcagtgccatgaaaaag
tctccatcgggaggtatccctcaggaagtcacacaggaagtgaacagaaggcctgtccaa
tggggccaatcggaagatgtgccaaacacatacagatctcaggaattagttgagatgact
gacatggagaatgactctgatgtgggcgggtatcctgtgctggagggtcacggcagagct
gcctccatgcccagactcaatgctggctttcagcggagccacttacgccacaccgccgga
acgtatctagcacctatcgcagacgtgagtcccatgcggcggtctatgtcctcgttgaca
ccacagagaggggtgcgagaggttaatctgagcgattatgacctggagaggcccaagatg
gccccgggccagaccctcgctcaggagagagagagggagcgagcccatcatcatcatcac
catcatcatcaccgctgccagcggcgcaaagacaagaagcacaaatcgttggatcgagcc
atcagcgaggagcagccaccgcctgcagcagatccaaacactgagtcaccgcctagggaa
cgatcacgggagcgagaccgtggccgctcccacgagaggaagcaccattcatcctcagcg
gcggaaaggaagcagcgatactactcttgtgatcgctacggcagccatgaacaaggccac
agtgtgtccaccgggcccagcagatccacatcgccaggagaaccccatgacccaaacagg
cttaagcagggaattaacacagctaaaggaagttcagtcattcatacctcaggcaccagc
ataccctgccgcgggcgtagacagctccctcagacgccccttacgcctcggcctgctgtt
gcctacaagactgccaactcctctccggtccagctcaacactgcccagtctacagggccc
tgccccactcgccttagtcgtggcctgtcagagcacgatgccctactcagcggttgcacc
caccgccaatctcccgtgcctgtcactcgtatcggctctgaccccaacttgggtcccctc
cagcaagactcaaacttgtctgaagcggacgacttccacgatgccttgagcacgtacggc
atgggccgctgccccaggactgcagcctccatcgcccacacatcatcaggtgcggccccc
acttccacactgctctcgcgcagccagagcggagtccccaacgggtatcactactccctc
ggagtgaacgcggcgcctggttcaagcggcagagcatctggaagctatcaggaaactgag
agaaatgactggtgttag
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