Sinocyclocheilus grahami (golden-line barbel): 107548774
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Entry
107548774 CDS
T04918
Name
(RefSeq) whirlin-like
KO
K21879
whirlin
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sgh03037
]
107548774
Cilium and associated proteins [BR:
sgh03037
]
Primary cilia and associated proteins
USH complex and associated proteins
107548774
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
USH1C_N
PDZ_2
HHD_RTEL1
PAH_ZNF598
DUF6288
C2H2_ASCIZ
Motif
Other DBs
NCBI-GeneID:
107548774
NCBI-ProteinID:
XP_016085066
LinkDB
All DBs
Position
Unknown
AA seq
885 aa
AA seq
DB search
MSTDLERLSLNSSSGNSLASSAHSLSANVKKLHNALNLLLSDLEREQFIHCLNVYHSKRN
VYDLVQTLKVILNVPSKRQLLPMLRLVIPRSDQLLFDQYTSEGLYLKSDVLARNGDPDGS
HEAANSSPTHGAHFSAPSASQTALRGSPDNISISSDGTATLIPLLGRNFLPGPPGEIRQV
TLKRHKSNEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRIGDQIMKVNDKVFDRVTH
AEAVKVLKGSKKLSMSVRSVGRIPGGYVTNHVYTWVDPQGRSVTPPPDLLTEHRSATLRR
TNSQGRSHMQLLQDGDEKKVNLVLDDGRSLGLMIRGGAEYSLGIYITGVDRGSAAECGGL
KPLFLIAVRILEPFGGNKQPSCLLFHRLLPPGGFYKGVAGSQVTLSSLVNQSRAMLEEQA
RHLLTEPERQTMGYYIQEYRDGHIGVEQLVMALLELFNTHAKFSLLSEVRGLVLPQDVER
FDGLVLRREIEALKARQGGGAGFQDSFSMVSYPDTLASSSASFMTNTTLSSARNDGATEN
NGEQSLERSNALPDISLDEIHSTSDSPPTFKPPPPPGLQRRPSRKATLSKRPSSSSSQSG
LYFTAPSRSQSKEPKHPKAPKPHTSPLDTLKIDVPAPQLAVVSQHTIGPFPRVQSPSKVK
PAVQSSSPIPPPAPNVPAPPGPPPPPPPPCPDKPAPSSPASNQHFVMVEVHRPNAEPDVN
EVRPLPQVRGGTLSQLSDSGQTLSEDSGVDIAESGRLSKESSPRPSRTRIPRDGHGGGET
SAKPPGLLEPTSTLVRVAKSTSTLGIAIEGGANTRQPLPRIVTIQRGGSASNCGQLKVGQ
VILEVNGVSLRGKEHREAARLIAEAFKTKEKDYIDFLITEFNVAL
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagacctggagcgcctgtcgcttaactcttcctcgggaaactctctggcgtct
agcgcgcattccctttccgccaatgtgaagaagcttcacaacgcgctcaacctgctgctc
agcgacctcgagagagagcagttcatccactgcctcaacgtgtaccactccaagcgcaat
gtgtacgatctggtccagacgcttaaagtcatactgaacgtcccgagcaagcgtcagctc
ctgcccatgctgcggctggttatcccgcgctcggatcagcttctgttcgatcagtacaca
tcagaggggctgtacttgaaatccgacgttcttgcgcgcaatggtgacccagacggctcc
cacgaggctgctaattcgagtccaacacacggggctcacttctcggctccttccgcgtct
caaaccgctctgcgcgggtctcctgataacatcagcatcagcagcgatgggacagcgact
cttattcctttactgggaagaaatttcttaccggggccgccaggcgagatccgacaggtg
accctcaagcgtcacaagagcaacgagggtttgggatttagtatccgcggaggatccgag
catggagttgggatctatgtgtcactggtggaaccgggatcactggctgaaaaggagggt
ttgagaataggagatcagataatgaaagttaatgacaaagtgttcgaccgggtcacgcac
gcagaggcagttaaggtgctgaagggcagcaaaaagctctccatgtcagtgcgttctgtg
ggacgtatcccgggcggttatgtcacaaatcatgtctacacctgggtggatccacagggg
cgcagcgtgaccccaccccctgacctgctgacggagcatcgaagcgccaccctgcgcagg
accaacagtcagggcagaagccacatgcagcttctgcaggacggcgatgagaagaaggta
aacttggttctggatgacggccgttctctgggtctcatgatccgcggaggggctgaatac
tctttaggtatctacatcacaggtgtggacagagggtctgcagcagagtgtggaggactg
aagccactgtttctgattgctgtccggatattggagccttttgggggaaacaagcagcca
agctgtcttctcttccatcgtcttcttcctcctggtggcttttataaaggtgtggcagga
tctcaggtgactctgtccagtttggtgaaccagagcagggccatgctggaggagcaggcc
agacatctgctgactgaaccggagaggcagactatgggttactacatccaagagtaccgt
gatggtcacatcggtgttgagcagctggtcatggccctccttgagctgttcaatacacat
gccaagttctctctgctgtcagaggtgagggggctcgtgctccctcaggatgtggagaga
tttgacggcctggttctgagacgagagatcgaggccctgaaggcgaggcaaggtggcgga
gctgggtttcaagactctttctccatggtttcttaccctgacacactggcctcctcctca
gccagcttcatgaccaacaccaccctcagctctgcacggaacgatggtgccacagagaac
aacggggaacagtctctggagcgtagcaatgccctgccagacatctctctggatgagatt
cattccacctcagattcccctcctacctttaaacctcctcctcccccagggcttcagcgc
cgacccagtcgaaaagccacgcttagcaaacgtccctcttctagctcctcccaatcgggt
ttgtacttcaccgccccttctcgttcccagagcaaagaacccaaacacccaaaagcaccc
aaacctcacacatctcctcttgacaccctcaagatagatgtcccagcacctcaactcgca
gtcgtgagccagcatactatcggaccgttcccccgggtccagtctcctagtaaggtgaaa
cctgctgtccaatcctcatctccgattcctccacccgcccctaatgtacctgcgccacct
gggccgccgcctcctcctccgcccccctgcccagataagcccgctccttcttccccagca
tccaatcagcactttgtcatggtggaggtgcacagacccaatgcagagcctgatgtgaac
gaggtgcggccgctgccacaagtgcgaggagggacattatcccagctgtcagacagcgga
cagaccctcagcgaggacagcggtgtggacattgccgaatctggacgtctcagtaaggaa
agcagcccacgtcccagccgcaccagaatccctcgggatgggcacggaggaggagaaaca
tctgccaaaccgccgggtctgttggagcctacatccactctagtgagagtggcaaaaagc
accagtactctgggcatcgcaatagaaggtggggcaaacacacgtcagcccctcccacgc
atcgttaccatacagagaggtggttcggctagtaactgtggacagctgaaggtgggtcag
gtgatcctcgaagtaaacggagtgtctctcagaggaaaggaacatcgggaagccgcacgt
ctcatcgcagaggcctttaaaaccaaagagaaggactacattgacttcttgatcacagag
ttcaatgttgctctataa
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