Sinocyclocheilus grahami (golden-line barbel): 107549026
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Entry
107549026 CDS
T04918
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107549026 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107549026 (hbs1l)
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107549026 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GTP_EFTU_D4
AAA_16
Motif
Other DBs
NCBI-GeneID:
107549026
NCBI-ProteinID:
XP_016085413
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MNYGNELQNAELSSLFIDYDDDDMYGQSVEDDYCISPATAAQFIYSRQDSRQARHVETLE
EAEYEEEEEEMPTSPTVASSLDPLQQGRLYSCLDQMRAVLGDSIPESTLTQAALKYDCDP
HRALDFILTEENTNAHTPPARTNSQPEPITTAAPQKAKAREAPESRVEAEVVPKVARMTV
SGKKQTMGFDVRSAEENGVVAPSVRRGASPEVTAAPTTETPSKPSAVNEDSTAPTPTRPT
GKSKQQLNIRAELEKRQGGKPLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQE
SKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETDSKVITLMDAPGHKDFIPNMITG
AAQADVAVLVVDASRGEFEAGFEAGGQTREHGLLVRSLGVTQVAVAVNKMDQVNWQQERF
QEIVSKLGHFLKQAGFKDSDVFYIPTSGLSGENLTTRCKVADLTAWYTGPCLLEQIDAFK
PPQRSVEKPFRLCVSDVFKDQGSGFCVTGKIEAGFIQTGDKVLAMPPNETCTVKGITLHD
EALDWAAAGDHVSLTVTGMDIIKINVGCIFCEPKEPIRACTRFRARILLFNIEVPITQGF
PVLLHYQTVSEPATIRKLVSVLHKSSGEVLKKKPKCLSKGQNAVVEIQTQRPVALELYKD
YKELGRFMLRYVGSTIAAGVVTEIKE
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgaattacggaaatgaattacagaacgcagaattgtcttccttgttcatagactatgat
gatgatgacatgtacgggcagtcagtggaggatgactactgcatctctcctgccactgcc
gcacagtttatctactcgcgtcaagactcgaggcaggctcgacatgtagagaccctggaa
gaggcagaatatgaggaggaggaagaggagatgcccacctctcccactgttgcaagctca
ctagacccactacagcaaggtcggttgtattcttgtttggatcagatgagagctgtgctg
ggagattcaattccagaatccacattaactcaggcagctctgaaatatgactgtgaccct
cacagagcccttgattttattctaactgaggagaacaccaatgcacacacccctccagcc
agaaccaactcacagcccgagcctatcaccacagctgcaccacagaaagctaaagcacgg
gaggctccagagagtcgtgttgaagcagaggttgtcccaaaggttgcccgcatgactgtg
tcaggcaagaagcagaccatgggctttgatgtgcgaagtgcggaagaaaacggagttgtt
gccccgtcagttcgcagaggggcgagtccagaggtcactgctgcaccaaccacagagacc
ccatccaaaccatcggctgtgaatgaagactctactgccccaaccccgactcgaccaact
ggaaagagcaaacagcagctcaacatccgtgctgaactggagaaaagacaaggaggaaaa
ccgctactcaacctggtggtcataggtcatgtagatgctggtaagagcactctcatgggt
catctgttatatctgctggggaatgttaataagagaaccatgcataaatatgagcaggag
tccaagaaagctggcaaggcctcatttgcttatgcatgggtactggacgagacaggagag
gagagagacagaggagtgaccatggatgtgggcatgacaaagtttgagactgactcgaaa
gttattactctgatggacgcaccaggacacaaagacttcattccgaacatgatcacaggg
gcggcccaggcagacgtggctgtgttagtcgtagatgccagccgtggggagtttgaggct
gggttcgaggcaggggggcagacccgtgaacacggcctgcttgttcggtctctcggagtc
acacaggttgccgtcgctgtcaacaagatggaccaggtcaactggcagcaggagaggttc
caggaaatcgtctctaaacttggtcactttctgaagcaggctggttttaaggattccgat
gtgttttacatccctaccagcggactatccggagagaatctgaccactaggtgtaaagtt
gcagatcttacagcctggtacactgggccatgcctactggaacagatagatgcgtttaaa
ccaccccagaggtcagtggagaagccattcaggctttgtgtctcagacgtcttcaaagat
cagggctctgggttctgtgtgacggggaagattgaggctggcttcattcagacaggagat
aaagttctggccatgcctcctaatgagacctgtactgttaaaggcatcactcttcatgat
gaagctttagactgggcagctgctggtgatcatgtcagtctaactgtaactggcatggac
atcatcaaaataaatgttgggtgtatattctgtgagcctaaagagcccatcagagcctgt
acacgattccgagcaagaattctactctttaatatagaagttcccatcacgcaaggcttc
ccggtactgttacattatcagaccgtaagcgaaccagccactattaggaagttagtcagt
gtattacacaagagcagtggagaagttctcaagaagaaaccaaagtgtttgagtaaagga
cagaacgctgtggtggagattcaaacacagaggcctgtggctctggagctctataaggac
tataaagaactggggcgcttcatgctgagatatgtgggctccaccattgctgctggagtt
gtcacagagatcaaagagtaa
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integrated database retrieval system
