Sinocyclocheilus grahami (golden-line barbel): 107549244
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Entry
107549244 CDS
T04918
Name
(RefSeq) brevican core protein-like
KO
K06795
brevican
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sgh00535
]
107549244
00536 Glycosaminoglycan binding proteins [BR:
sgh00536
]
107549244
04091 Lectins [BR:
sgh04091
]
107549244
Proteoglycans [BR:
sgh00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
107549244
Glycosaminoglycan binding proteins [BR:
sgh00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
107549244
Lectins [BR:
sgh04091
]
C-Type lectins
Lecticans
107549244
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
EGF
hEGF
ig
I-set
EGF_2
Motif
Other DBs
NCBI-GeneID:
107549244
NCBI-ProteinID:
XP_016085741
LinkDB
All DBs
Position
Unknown
AA seq
1295 aa
AA seq
DB search
MRSAMFLHVLLRAICLFVLSSCAVLSPAADETTFLQVTIPNSPPVSAILGGSLTLPCLVS
LPGDSRTPSLGRHAVLTQPRVKWSFLSSNRETEILVARGERVKVSELYKGRASLLNYAAS
SADLTLRLDELIHNDTGFYRCEVQHGLEDAHDQAQVKVKGVIFHYRHTSSRYAFTFDEAK
DACKDIGAQIASPEQLMAAYRSGYEQCDAGWLSDHSVRYPIQMPREGCFGDMDGLPGVRN
YGMMDNDELYDVYCYVENIHGEVFHGSSPQRFNLSEAKTYCEQQRAQLATTGQLYAAWND
GLNHCSPGWLADGSVRYPIVTPRERCGGSEPGVKTVYHFSNQTGFPPQTRHDAYCFRANS
NSQTVSPIDHMATEPEDTEQHIVTLAVPQEEYSVDQITQQSENEAQGAVESFSIYSTQTT
SEPEEHNHTTSPQLDEDSTYRDSTTPTSTERYLESTEVTWQKVESVPEIYIDPKHTDFTQ
KGEPDIKASAVDGVKSSNHRHYQPMPDTNLQPEEPINFIPPAEAQPETTEEPSSQPKEID
GSKHFQPMPETNLEDEDKDHVTSEISMTTEDTTLEFDSSNATTTQHASVQSSPSTYLPEG
ATVEENAGNITETPEPDEDWGLFTHTTQSTSTSTSSTEGWLEGSGEDLTFSFTQKAEHLV
TSHNSETYGASTPETMTESFSLTHLNNINPTFTPRHPDTSADHHNAEETSTETLPVSLGA
VDDGSDYSTVSMTPKETESSESSGEREDILPVTLLTTPTPHLLGTSTTHGRVQVEINSPQ
EMEGVLSESTTPSGFGIVEEELEKVEQVGLGEEPNQRIITSTELNNSTVTFSIDGSDEDE
DEDESSGEREPSGNRSSVIKHPYSDVATITPSNLTDMQDLNETNSDNDDNQASTVGSMKS
LEVTFLPHGTQSPIWQTVVSSTNPGEFRADVEFSGEAALTTDEIKGLDESDSTNVPINEK
TTQTQKPSTTSAINEDDDDDDNDYELMTKANTDNTEDENDVTTTPESSTLPARPTQRVLV
RTGYISDACLENPCKNGGTCVDSGAGHRCLCLPTYGGDFCETDLEHCEPGWEKFQGFCYK
HFTKRQKWEVAEQHCRMCGGHLVSVMSPEEQAFINDKYREYQWTGLNDKTIEGDFRWSDG
NPLLYENWYRGQPDSYFLSGEDCVVMVWYDDGRWSDIPCNYQLSYTCKKGIAAFCGQPPL
VLHAKMFGRRQLKYRANSQVRYYCEPSFIQRQNPVITCQSNGQWEEPMITCSPVGSAYSN
GEPVTWPTGQNKEIIIEETTTKTTTPEYVDIKWIF
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgagatcagcgatgttcctgcatgtactgctgcgtgccatctgcctctttgtcttgtca
tcttgtgccgtcctcagtcctgcagcagatgagaccacattcttacaagtgaccattccc
aatagccccccagtgtctgccattttggggggctccttgactctgccctgcctggtgagt
ctgcctggtgactcccggaccccgtctttgggccgacatgctgtactgacccagccacga
gtcaaatggagctttctttcatcaaacagagagacagagatcttagtggcccgtggtgag
agggtaaaggtgagtgagttgtataaaggcagggcatcactgctgaattatgctgcctct
tcagctgatctcaccctcagactggatgaactgatacacaacgatacaggcttctaccgc
tgtgaagtccagcacggcttggaggatgctcatgaccaggcccaagtcaaagtaaaaggt
gtcatcttccattatcgccatacctcaagtcgctatgccttcacttttgatgaggccaaa
gatgcgtgtaaagatattggagctcagattgcttctccagaacagctgatggctgcgtac
cgcagcggttatgagcagtgtgacgctggctggctttcagatcactccgttagataccca
atccagatgccacgtgaagggtgttttggagacatggatggattaccaggcgttcgaaac
tatggcatgatggataatgatgaactatatgatgtgtattgctatgtggagaacattcat
ggagaggtttttcatgggtcatccccacagcgcttcaacttgtcggaagctaagacatac
tgtgagcagcagagagctcagctagccaccactggccaactctatgccgcctggaatgat
ggtctgaaccactgcagtcctggttggcttgctgatggaagcgttcgctaccccattgtg
acccctcgtgaacggtgtgggggttctgaacctggtgtcaagacagtttatcattttagc
aatcaaacgggattccccccacagactcggcatgacgcttactgcttcagagctaacagc
aactctcaaacagtctcacctatagatcatatggcaacagagccagaggacaccgagcag
catattgtgactttagcagttcctcaagaggagtatagtgtggatcagatcactcaacag
tcagaaaatgaagcacagggggctgttgagtccttctccatttacagcacacagactact
tcagaaccagaggaacacaaccacaccacaagccctcagttagatgaagatagcacctat
agagactccaccaccccaaccagcacagagagatatcttgagtccactgaggtcacctgg
caaaaagttgagtctgttccagagatttacatagatccaaaacacactgatttcacacaa
aaaggagaaccagatataaaagcttcagcagttgatggtgttaaaagcagtaatcataga
cactaccaaccaatgccagataccaacctacagccggaagagcccatcaatttcatccca
cctgcagaggctcagcctgagacaacagaggaaccatcctctcaaccgaaggagatagat
ggctccaaacacttccaacccatgcctgaaaccaacctggaggatgaggataaagatcat
gtgactagtgagatctccatgaccactgaggatactacactggaatttgactcaagcaat
gccaccacaactcagcatgcttcagtccagtcaagtccctcaacatacctacctgaaggt
gctacagtagaagaaaatgcagggaatatcacagaaactccagagccagatgaagactgg
ggtctttttacacacacaactcagtccacatcaacaagcacatccagcactgaaggttgg
ttggagggttccggtgaggatttgaccttttctttcacacaaaaggccgaacatctggtc
acctcgcataattcagagacatatggagcatctacacctgagactatgacagagagcttc
tcattaacacatctgaacaatattaacccaacttttacacccagacacccagacacttct
gcagaccatcacaatgctgaggagacctcaactgagactcttcctgtgtctcttggtgca
gttgatgatggcagtgattattcgaccgtgagcatgacaccgaaggaaaccgaatcttct
gaaagttctggcgaacgtgaagacatcctgccagtcacactcttgaccaccccaacgcct
cacctgttgggcacatcaaccacacatgggcgtgtacaggtagaaatcaattctccacag
gaaatggaaggtgtcctctctgaaagcacaactccatctggctttgggattgtggaagaa
gaattggagaaggtggagcaggttgggcttggagaggaacctaatcaacgaatcatcaca
tccactgagcttaataattctactgtaactttcagcattgatggcagtgatgaggatgag
gatgaggatgagtcttctggagaaagagaaccttcaggaaacaggtcttcagttattaag
catccgtactcagatgtggccaccatcactccctctaatctgacagatatgcaagacctt
aatgaaacaaatagtgataatgatgataatcaggccagcactgtgggatccatgaaaagt
ctggaggttacatttcttcctcatgggacccaaagtcccatctggcaaactgtggtgtct
tccacaaacccaggagagttcagagcagatgttgaattcagtggggaagcggcacttacc
acagatgaaatcaaaggcttagatgaatctgactccaccaatgtacccatcaatgagaag
acaacgcaaacccaaaaaccatccactacgtcagccatcaacgaagatgatgatgatgac
gataacgattatgaactcatgactaaagcaaacacagacaatacggaagatgagaatgat
gtcacaaccacacctgagtcttccactctgcctgccagacccacacagagagtgctggtc
aggacaggctacatttcagatgcatgtctggagaacccttgtaaaaatggaggtacctgt
gtggacagtggagcaggtcataggtgtctctgtctacccacttatggaggagacttttgc
gagacagatctagagcactgtgaaccaggctgggaaaagttccaagggttttgttacaaa
cattttacgaaacggcagaaatgggaggtggcagagcagcactgtcgcatgtgcggaggt
cacctggtctctgttatgtcacctgaggaacaggcgtttatcaatgataaatacagggag
tatcagtggacgggtctcaatgacaagaccattgagggagatttccgctggtcagatggg
aaccctctgttgtatgagaactggtatcgtggacaaccagacagctacttcctgtcagga
gaggattgtgttgtcatggtgtggtacgatgatgggcgttggagtgatatcccttgtaac
taccagctgtcctacacgtgcaagaagggcattgcagcattctgtggccagccccctctc
gtactgcacgctaaaatgtttggacgtcgtcaactaaagtacagggccaattcacaggtg
cgctactactgtgagccaagcttcatccagagacaaaaccctgttatcacatgtcagagc
aatggacagtgggaggaacctatgatcacttgttcaccagtgggatcagcatactcaaat
ggagaaccggtaacatggcccacaggtcagaacaaggaaataatcatagaagagacaaca
acaaaaacaacaacacctgaatatgtggacataaaatggatcttttaa
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integrated database retrieval system
