Sinocyclocheilus grahami (golden-line barbel): 107549565
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Entry
107549565 CDS
T04918
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D-like isoform X1
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010
MAPK signaling pathway
sgh04020
Calcium signaling pathway
sgh04218
Cellular senescence
sgh04260
Cardiac muscle contraction
sgh04261
Adrenergic signaling in cardiomyocytes
sgh04270
Vascular smooth muscle contraction
sgh04530
Tight junction
sgh04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107549565
04020 Calcium signaling pathway
107549565
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
107549565
09144 Cellular community - eukaryotes
04530 Tight junction
107549565
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
107549565
09153 Circulatory system
04260 Cardiac muscle contraction
107549565
04261 Adrenergic signaling in cardiomyocytes
107549565
04270 Vascular smooth muscle contraction
107549565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107549565
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107549565
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
107549565
NCBI-ProteinID:
XP_016086177
LinkDB
All DBs
Position
Unknown
AA seq
2083 aa
AA seq
DB search
MDEPEEPTEGANYASGSRAPVSSDAPPVRSETPPITSHHSPAQSAALSWQAAINAARQSQ
GTPKTMNFSAAASTAPAGSLAQRKRQQYAKSKKQGSTTNSRPPRALFCLTLNNPVRRACI
NLVEWKPFDIFILLSIFANCVALAVYIPFPEDDSNSTNHDLETVEYAFLIIFTIETFLKI
IAYGLVMHQNSYVRNGWNMMDFVIVIVGLFSVVLELVTKDRDVSGQSGGKPGGFDVKALR
AFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHAT
CYLNDTRTLAEEDPGPCSLSGHGRHCPLSGTVCRDGWHGPNNGITNFDNFLFAMLTVFQC
ITMEGWTDVLYWMNDAMGSELPWVYFVTLVIFGSFFVLNLVLGVLSGEFSKEREKAKARG
DFQKLREKQQLEEDLKGYLDWITQAEDIDPDNDEEGDQEAKRNRVTLGDLTHRKNKGNSG
WFSQSTETHESIPTSETESVNTENPGEDEKVCCGPICQKLTKSKFSRWRCWNRFCRRKCR
AVVKSTIFYWLVILLVFLNTLTISSEHYNQPDWLTEVQDVANKVLLALFTCEMLVKMYSL
GLQAYFVSLFNRFDCFVVCGGIVETILVELEIMSPLGISVFRCVRLLRIFKVTRHWASLS
NLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETVTKRSTFDNFPQALLT
VFQILTGEDWNTVMYDGIMAYGGPSSSGMLVCIYFIILFICGNYILLNVFLAIAVDNLAD
AESLNSAQKEEEKRNKRKKNRSMSIYKRDGDDGNLKASGDQEGNQDQTEDMTDSSEEDEE
EEPEVPSGPRPQRLSELNLREKTPPIPEGSAFFILSNTNPIRVACHRLINHQIFTNLILI
FIMLSSVSLAAEDPIRNFSARNIVLGYFDYAFTAIFTVEILLKMTAFGAFLHKGAFCRNY
FNLLDLLVVGVSLVSFGIQSSAISVVKILRILRVLRPLRAINRAKGLKHVVQCVFVAIRT
IGNIMIVTTLLQFLFACIGVQLFKGKFYRCSDDAKTSPEDCRGTFIVYSIGEMALPQMRE
RIWYNSDFNFDNVLMAMMALFTVSTFEGWPALLYKAIDSNKENMGPIYNYRVEISIFFII
YIIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNPY
QYKFWYVVNSTGFEYVMFVLIVLNTLCLAVQHHGQSRLFNYGMDILNMVFTGVFAVEMIL
KLVAFKPKHYFADAWNTFDALIVVGSIVDIAITEINNTEDSARISITFFRLFRVMRLVKL
LSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQVFGKIAMVDGTSINRNNNF
QTFPQAVLLLFRCATGEAWQLIMLACLPGKQCDSESDYNPGEEKTCGSNFAILYFISFYM
LCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLL
RRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNMEQA
NEELRAVIKKIWKRTSMKLLDQVVPPAGDDDITVGKFYATFLIQDYFRKFRKRKEQGLVG
CQPYLNTTTALQAGLRTLHDIGPEIRRAISCDLQDEGLVDVNLHEEEEIYERNGVVFGNH
VSGDQYGSVTQRPLQLPLPLCSTQNYCPSMSDKSSNSNINNANMPAVTAFPNGWHSRCRR
LSGTLVSSLSSYLNLRSDGEPQLRTHSRRPDTTAVGYPIIHVETSTLGDISNDDRNSGEY
YSGDEFNEDGVMLATDRSYFQDTLIDGTPAGQQDVCECVCDDGEHLISQQSQRSSKRLLL
STAQSSHKSAFHFECLRKQNSQDEIPLRPTGLPQHQVKMPTGQESSRTRLSPTRSIRSWV
TPPATPPSYTPLIQTTPSASSTPGLVHRGFWNSQQASDWSTRSPSPSFLKVPPRLCGHHL
QQRSSAQSLVEAVMISGGLGKYAKDPKFVTVTKHEIADACEMTIDEMESAASNLLNVTLG
RGPETDEAGLCQNNLRDYSDEEMDTSNKCEEDLADEMIYVSVL
NT seq
6252 nt
NT seq
+upstream
nt +downstream
nt
atggacgagccagaggaaccgactgaaggggcaaactatgccagtggcagcagagccccc
gtctctagtgatgcccctcccgtccggtcagaaacgccgccaatcaccagccatcattca
ccggcccagtccgccgcgctctcctggcaggccgcgattaatgcagccagacagtctcag
ggcacccccaaaaccatgaacttctctgctgctgcaagcactgctccagccggctcgctc
gcccagaggaaacgccagcaatatgccaaaagcaagaaacagggaagcaccactaatagc
agacctccaagagcacttttctgcctgactctcaataaccctgtgcgcagagcgtgcatt
aacttagtggagtggaaaccttttgatatctttatactgctgtcaatatttgccaactgt
gtggccttagctgtttacatcccctttcctgaagacgattccaactcaactaatcatgat
ttggaaacagtagaatatgccttcctgattattttcacgattgaaaccttcctcaagatc
atagcttatggacttgtgatgcaccagaactcctatgtgagaaacggctggaatatgatg
gattttgtcatcgtcattgtaggtctcttcagtgtcgtgctggagctggtaaccaaagat
cgagatgtcagcgggcagtcaggtgggaagccgggcgggtttgatgtcaaggctttacga
gcgttcagagttctgcggcccctccgcctggtctcaggagtgccaagcttacaggtagtg
ctgaactccattattaaggccatggttcctctgctgcacattgctctgctcgtactcttc
gtcatcatcatctatgccatcatcggactggagctgttcatcgggaagatgcatgcgacc
tgctatctgaatgacacgcgtacattagcagaggaggatcccggtccctgttctctttct
ggtcatgggcgtcactgccctctcagtggcaccgtgtgtagggatggttggcatggaccc
aacaacggcatcacaaactttgacaacttcctgtttgccatgctgactgtgttccagtgt
atcaccatggagggctggactgatgtgctgtactggatgaatgatgctatgggctctgag
ttgccttgggtctattttgtcactctggtcatttttggctccttctttgtcctcaatcta
gtattgggcgttctcagtggagagttctctaaggagcgtgagaaggccaaagctcgtgga
gatttccagaaactgcgtgagaagcagcagcttgaggaggatctgaagggctatctggat
tggatcacacaagctgaggacatcgaccctgataatgatgaggagggagatcaagaggcc
aaacgcaaccgggtgacactgggcgatctcacccacaggaagaacaaaggaaactcgggc
tggttcagtcagtccactgagacgcatgaaagtatccccacaagtgagacagagtctgtg
aacacagagaacccaggagaagatgagaaagtctgctgtgggcccatctgtcagaaattg
acaaagtcgaagttcagccgctggcgttgctggaacagattttgtcgccggaagtgccga
gctgttgtgaaatccaccatcttctattggctggtgattctgctggtgttcctcaataca
ctcacaatatcatccgaacattataaccagcccgactggctcacggaagtccaggatgtg
gctaataaggtgttgttagccctgttcacatgcgagatgctagtaaaaatgtacagtctg
ggactacaggcatactttgtgtcgcttttcaaccgcttcgactgctttgtagtttgtgga
ggcatagtggagacgatcctcgtggagcttgagatcatgtctcctctcggcatctctgtg
tttcgctgcgtccggctcctcagaatctttaaagtcacacgtcactgggcgtctctgagt
aacctggtggcatcacttttgaactccatgaagtccattgcatccctactgctgttgctc
ttcctcttcatcattatcttcagtttgcttggcatgcagctcttcggaggaaagttcaac
tttgatgagactgttaccaaacgaagcacttttgacaactttcctcaagccctgctgact
gtctttcagatcctgacgggtgaggattggaatacagtgatgtatgatgggatcatggcg
tatggaggcccctcctcctcaggcatgcttgtgtgcatctacttcatcatcctcttcatc
tgtggaaactacatcttactgaacgtattcttggccattgctgtggataacctggcagat
gctgaaagtctgaactcagcccagaaagaggaagagaagaggaacaagaggaagaaaaac
aggagtatgagcatatacaagagagatggtgacgatggaaacttaaaggcatctggtgat
caggaaggtaatcaggatcagacagaagacatgactgactcctcagaggaggatgaggag
gaagagcctgaggtaccgtcagggccgcggccccagagattgtcagagctgaacctcaga
gaaaagacgccacccatcccagagggcagcgccttcttcatccttagcaacaccaacccg
atccgtgtggcgtgccatcggctcatcaatcatcagatcttcaccaacctcatcctcatc
ttcatcatgctgagctccgtctcgctggcagccgaggaccccatccgtaacttctctgca
cgaaacattgttcttggttattttgactatgccttcactgctatatttactgtggagatc
ttgctgaagatgactgcgtttggtgctttccttcacaaaggagctttctgcagaaattac
tttaatttgctggatctgctggtggttggagtctcccttgtttccttcggcatacaatcg
tcagctatttcagtggtgaagatcttaaggattctgcgtgtgcttcgacctctgagagcc
atcaacagagccaaaggactcaaacatgtggttcagtgtgtatttgtggccatcaggacg
attgggaacatcatgattgtcaccacacttcttcagttcttgtttgcctgtatcggtgtg
cagctgtttaaggggaaattctaccgctgttctgatgatgcaaaaacaagtccagaggac
tgcagagggacgtttatcgtgtacagtattggcgagatggcactgccacaaatgcgtgag
aggatctggtacaacagtgactttaactttgataatgtgctgatggctatgatggccctc
ttcaccgtctcaacgtttgagggctggccagccctgctgtacaaggccatcgactcaaac
aaggaaaacatgggtcccatctacaactaccgcgtggagatctccatcttcttcatcatc
tacatcatcatcatcgccttcttcatgatgaacatttttgtgggttttgtcattgtcacg
tttcaggagcagggcgagaaagagtacaagaactgtgagctggacaagaaccagcgccag
tgtgtggagtacgctctgaaagcccgtccgctgaggagatacatccctaaaaacccgtac
cagtataagttctggtatgtggtgaactccacgggctttgagtatgtcatgtttgtgctc
atcgtcctcaacacactgtgtctggccgttcagcatcacggccagtcacgtcttttcaat
tatgggatggacattttgaacatggtgttcacgggtgtctttgcagtcgaaatgattctc
aaactggttgccttcaaaccaaagcactattttgccgatgcatggaacacgtttgatgcc
ttaattgttgttggtagcatcgttgacattgcaatcacagagatcaataacacggaagac
agcgcaagaatttccatcacattcttccgtctgtttcgtgtcatgcgcttagtgaagttg
ttgagcagaggagagggcattcgtacgctcctctggaccttcatcaaatcatttcaggct
cttccgtatgtggctctgcttattgccatgttgttcttcatctatgctgtcattggaatg
caggtgtttgggaagatcgccatggtggatggaaccagtattaatcgtaacaataatttc
cagacctttccacaagctgtgcttctgctgttcagatgtgcgacaggtgaggcatggcag
ctgatcatgttggcgtgtttgcctggcaaacagtgtgactctgagtccgactataaccct
ggagaagagaaaacctgcggcagcaactttgctatcctctacttcatcagcttctacatg
ctctgtgcttttctgatcattaatctgtttgtcgctgtcatcatggacaactttgactac
ttgacacgtgattggtcgattcttggaccacatcatttagatgaattcaagaggatttgg
tcggaatatgatcctgaggccaagggccgtataaaacacttagatgtggtgacgttactg
cgcaggattcagccgccgctgggctttggcaagctgtgtcctcatagagtggcttgcaag
aggttggttgccatgaacatgccactaaatagcgacggtacggtcatgttcaatgccaca
ctgttcgctctggttagaactgctctgaaaatcaagaccgaagggaatatggaacaagcc
aatgaggagttacgagccgtcatcaagaagatctggaagagaaccagcatgaaactcctg
gaccaagtagtgccacctgctggagatgatgacatcactgtggggaagttctatgccact
ttcctgatacaggactacttcaggaaattcaggaaacgtaaagaacaaggtcttgtggga
tgccaaccctatttaaacaccactaccgccctgcaggctggtctgcgcacactgcatgat
atcggccctgagatccgtcgagccatatcatgtgatctacaggatgaaggtctagtagac
gtcaacctccacgaggaggaagagatatacgaaaggaatggggttgtgtttgggaatcat
gtgagtggagatcagtacggcagcgtcacacagcgtcctctgcagctcccgcttcctctg
tgctccacccaaaattactgtccgtcgatgtcagacaaatcatccaactccaatatcaac
aatgccaacatgccagcggtcactgcctttcccaacggctggcacagtcgctgccggcgg
ctctctgggaccctggtgtcctctctgagctcctacctcaacctcaggagtgatggagaa
cctcagctcaggactcactccagaaggccagacaccactgctgtcggatatccgatcatc
cacgttgaaacctccaccctgggtgacatcagtaatgatgacaggaactctggggagtat
tacagtggagatgagtttaatgaggatggtgtcatgctggctacagacaggtcttacttt
caggacactttaattgatggtactccagctggacaacaggatgtgtgtgaatgtgtctgt
gatgatggtgagcatcttatatcccagcagtcccagaggtcatcaaaacgactcctgctg
tccacagctcaatcctctcacaagtctgctttccatttcgagtgtctgcgcaaacagaac
agtcaagatgagattcccctgcgtccaacaggcctaccgcagcatcaggtgaagatgccg
acgggacaagaatcgagtagaacacgactctctccgactcgctccatccgctcctgggtc
acgcctccagccacgcctccttcctacacccctctgattcagaccacgcccagcgctagc
agcactccgggattggttcacaggggcttctggaattcccagcaggcctctgattggtcg
acacgttcgccctccccctccttcctgaaggttcccccccgactgtgcggccatcacctg
cagcagcggagcagcgctcaaagcctggtggaagccgtgatgatatcgggtggattgggc
aaatatgcgaaggatccaaagtttgtgacggtgacaaaacacgagatcgcagatgcttgt
gaaatgacgattgatgagatggaaagtgctgctagcaatttactgaacgtgacgctaggc
cgtgggccagagacagacgaggcgggcctgtgtcagaataatctgcgtgactacagcgat
gaggagatggacacgagcaataaatgcgaggaggatctcgctgacgaaatgatctacgtc
tcagtattatag
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integrated database retrieval system
