Sinocyclocheilus grahami (golden-line barbel): 107549574
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Entry
107549574 CDS
T04918
Name
(RefSeq) general transcription factor IIH subunit 1-like
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03022
Basal transcription factors
sgh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107549574
09124 Replication and repair
03420 Nucleotide excision repair
107549574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgh03021
]
107549574
03400 DNA repair and recombination proteins [BR:
sgh03400
]
107549574
Transcription machinery [BR:
sgh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107549574
DNA repair and recombination proteins [BR:
sgh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107549574
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
107549574
NCBI-ProteinID:
XP_016086205
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MYVSQKISPDGKAKIQLQLLLHTGESTTFHFANGSTALKDRDATKELLQQLLPKFKKKAN
KELEEKNRMLQEDPVLFQLYKDLVVSQVISAEEFWANRLSLNTVEHSLSNNNKQEVGISA
AFLADIRPQTDGCNGLRYNLTSDIIESIFRTYPTVKQKYAENIPHNMTEKEFWTRFFQSH
YFHRDRISTGQQDIFSECAKQDEKGLKSMVTQGVKNPMVDLLSLEDKSLDEGYGTATVPT
TSNSSNKSLRENSNSAIIKRFNHHSAMVLAAGLRKAEAPSDQASETSSTDGNSRDSDFFQ
PPLKKVKLQESIEYDDLQGDSGRQTIALNLKKSDRYSHGPIPLQSQHYTTSQDIINSISI
IQHEMRNYKPRLTQVMSSNAASSAITALSPGGLLMQGGGQQTINQLVPTDVQSELKHLYT
AAGELLRHFWSCFPVNTPFLEEKVVKMKSNLERFQVTKLRPFQEKIQQQYLSTNLTGHLE
EMLQAAYSKFQVWQTRRMMRKT
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgagtcagaagatcagtcctgatgggaaggcaaagatccagcttcagctgctt
ctgcacacaggagaaagcaccacctttcatttcgctaatgggagcacagcactgaaggac
agagacgccaccaaagaactcctacagcagctcctgcccaagttcaagaagaaagccaat
aaagagctggaggagaagaacaggatgttgcaggaagaccccgttctcttccagctctat
aaggacttagtggtgagtcaggtgatcagcgctgaggagttctgggccaatcggctgagc
ctgaatactgtggaacactccctctccaacaacaacaaacaggaagtgggcatttctgct
gccttcctggccgacatcagaccgcagacagatggctgcaacggcctgcgctacaatctg
acctctgacatcatcgagtcgatcttcaggacctaccctacagtcaagcagaaatatgct
gagaatattcctcacaacatgacggagaaggagttctggacgcggttctttcagtctcat
tacttccacagagaccggatcagcacgggccagcaggacatcttctcagagtgtgccaaa
caggacgagaagggcctgaaatcaatggtgacccagggagtgaagaaccccatggtggat
ctgctttcactcgaggataaatcattagatgagggttacggcacagcaacagttcccact
acatcaaactcatccaacaaatcactgagagagaacagcaactctgccataatcaaacgc
ttcaaccaccacagtgccatggtgctggcggccggcctacgcaaagcggaagctcccagt
gatcaagccagtgagaccagcagcactgatgggaactccagagattcagatttcttccag
ccgccactcaaaaaggtaaaattgcaagaatccatagagtacgatgaccttcagggtgac
tctgggcgtcagaccatcgctctgaacctgaagaaatcagacagatattcccatggcccg
atccctcttcagtcacagcattacaccaccagtcaagacattatcaactccatcagcatt
atccagcacgagatgaggaactataaaccccgtctgacgcaggtgatgtccagcaatgcg
gcgagctctgccatcacagcgctgtcacctggagggcttctgatgcagggaggaggccaa
cagaccataaaccaattagtgccaactgatgttcagagcgagctgaagcacttatataca
gctgccggagagctgctccgacatttctggtcctgtttccccgtcaacactcccttcctg
gaggaaaaggtggtaaagatgaaatctaacctggagagattccaggtgacaaagctccgc
ccctttcaagaaaagatccaacagcagtatttgagcacgaacctaacgggccacctggag
gaaatgcttcaggctgcgtacagcaagttccaagtctggcaaacgcgccgaatgatgaga
aaaacctga
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