Sinocyclocheilus grahami (golden-line barbel): 107549673
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Entry
107549673 CDS
T04918
Name
(RefSeq) afadin-like
KO
K05702
afadin
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04517
IgSF CAM signaling
sgh04519
Cadherin signaling
sgh04520
Adherens junction
sgh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
107549673
04519 Cadherin signaling
107549673
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
107549673
04530 Tight junction
107549673
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AFDN
RA
DIL
FHA
PDZ
PDZ_6
Yop-YscD_cpl
RA_2
PDZ_2
RA_3
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
107549673
NCBI-ProteinID:
XP_016086334
LinkDB
All DBs
Position
Unknown
AA seq
1895 aa
AA seq
DB search
MSGSREEERRKLADIINHWNANRLDLFEISQPTEDLEFHGVMRFYFQDRVAGNFATKCIR
VSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERKLDLDEKPLVVQLNWNKD
DREGRFVLKNENDIMPKKSLTNGPEKEKEGVIQNFKRTLSKKEKKKEKKREKEAFSRIPD
GDDHTLNREDGENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRSGDG
RPDSGGTLRIYADSLKPNIPYKTILLSTTDMADFAVAEALEKYGLEKENPRDYCIAQVRF
NAVCRCVSRCSVCSWLLCMRPVLGRGSHYAYYYCHHEDGSDSRDKPKLYRLQHSLTEVGS
DRCEEGNIQLFGPGILPHHCELMHEDGLVTVTPVSLDAETFVDGQRISDTTVLRSGVTVQ
FGATHVFKFVDPSYDHSMSKRDPGPMMKGRHKSGLQHSLTEVGSDRCEEGNIQLFGPGIL
PHHCELMHEDGLVTVTPVSLDAETFVDGQRISDTTVLRSGVTVQFGATHVFKFVDPSYDH
SMSKRDPGPMMKGRHKSGPPIAEDAFLSAIINYTNSSTVHFKLSPTYVLYMTCRYVMSSQ
YRPDISPSERTHKVIAIVNKMVSMMEGVIQEIAEGDQKQKNIAGALAFWMANASELLNFF
KQDKDLSRITLDAQDVLAHLVQMAFKYLVHCLQSDLNNYMPAFLEDPDEQNPQRPKIEDV
LHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNKLVTEADSGLCSHYWGAILRQQ
LSHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYSMQDVQNINNTCFKLNSLQLNALL
SNYHCAPDEPYIPPELIDHVVTVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGYSC
DVVRNIPNGFQEFLEPLCQRGFCRLTPHPRSSGTWTIYFEGADCDSHFSADTSELLMQKE
PEIVTVTLKKHNGMGLSIVAAKGAGQDKLGIYIKSVVKGGAADVDGRLAAGDQLLSVDGR
SLVGLSQERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQPSPMMPRASDRGRGDKGKM
RPKSEGFELYNNSVQNGSPESPQGTWDTYPEPKKEDRLLKNRADHRSSPNVANQAQSPGG
KPVYPGAPGKITSVSTGNLCPDEEPSPTHPEAYPIPTQTYPREYFTFPASKSQDRMDPGQ
PWQNNELEPLPPMDNHSNNSMAMQRVARSQEELCDMPGGYPGEHLCQEDLMHLQQQREAE
YQRGGGEHWNHQMSSSVESSTSSQEHLNYSSSSGSRIQGNHKSGPGRWKTPIAPHSGPVG
VSQPSRSDLPPPPPPPPAHYDYEPQTDLPLPPPPSVTQQQAAAAAATADRKKREEQQRWY
EKEKARLEEERDRKRRDQERKLVQIRNPPGPVMHNNQHGPLPPAPQHQQMPHPQLPMQVP
QTYLPPVQPPQPPQPQPARPDKLSSLPRQPPQDTVIRDLLPQQQPRTIERRDLQYITISK
EELSASDSLSPDPWKRDAREKLEKQQQLHIVDLLDKEIQELQAKPERTAEENDRLRKLML
EWQFQKRLQESKQNEEDEEEEEDDEDVDTTLIMQRLEAEKRARLQDEERRRKQQLEEIRK
REAEERAKQEEERRWREEERARREAEEKRRQEEEYYTRLEVERRRQHEEAERKLLTPDEP
GLYRPPLPRDYQPPSPASTPATNNNSAPPPPPQRNTSYLKTQVTSPDTIYTAKFVSYNDE
EEEEEEEEEEDAGLTGQVKLSATRKSYGDLPPAPKSQPPPTARKPRPVSDGIFLSNSFQL
PAAANANSTAPKAGQPPHPPAKPSFIPSANSKGRDAEESKGPDLSPAHPPFIIGSFVFMF
WGFFWCSFVPFPVLQWRLGALHFQHFLYLSICKFS
NT seq
5688 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggagccgagaggaggagcggcggaaactcgccgacatcatcaaccactggaac
gccaaccggctcgacctgttcgagatcagccaaccgaccgaggacttagagttccatggc
gtgatgcgcttttacttccaggatcgagtggcggggaacttcgccacaaagtgtatccga
gtgtccagcacggcgaccacgcaggatgtgatcgagacgctggcggaaaagttcagaccg
gatatgaggatgctgtcttctcccaaatactccctctatgaggtccatgtcagtggcgaa
gagaggaaactggacttggatgagaaaccactggtcgtacagctgaactggaacaaagac
gacagagagggccgcttcgttctcaagaacgagaacgacatcatgcccaagaaatcactg
acaaatggccctgagaaagagaaggagggggtgatccagaacttcaaaagaacactgtcc
aagaaggagaagaagaaagagaagaagagggagaaggaggccttttccagaattccagat
ggagacgatcacacactgaaccgcgaagatggagagaactctaggttggctgctgaggta
tataaagacatgccagagaccagtttcacacggaccatttctaaccccgaggtggtgatg
aagaggagacgacagcagaaactggagaagaggatgcaagaattccgcagtggagacggt
cgaccggactcaggagggactctgaggatctatgccgatagtctgaagccaaacattccc
tacaagaccatcctgctctcaactactgatatggctgactttgctgtggccgaggctctg
gagaaatacggtctggagaaggaaaatcccagagattactgcatcgcccaggtgaggttt
aatgcagtgtgtcggtgtgtgtcccgctgttctgtctgctcctggctcctgtgcatgcgt
cccgtcctagggcgagggagtcactatgcctactactactgccatcatgaagatgggtca
gactccagggataaacccaaactttaccgattacagcacagcctcactgaggttggatct
gaccggtgtgaagaaggaaacattcagctgtttgggcctgggattctgcctcaccactgt
gaactgatgcatgaggacgggctggtgactgtgacccctgtcagtttggatgctgagaca
ttcgtggatggacagcggatctctgacactacggttctgcgcagcggggtgaccgtccag
ttcggagccactcacgtcttcaaattcgtagaccccagctatgaccacagcatgtccaag
agagacccagggcccatgatgaagggcagacacaaatcaggattacagcacagcctcact
gaggttggatctgaccggtgtgaagaaggaaacattcagctgtttgggcctgggattctg
cctcaccactgtgaactgatgcatgaggacgggctggtgactgtgacccctgtcagtttg
gatgctgagacattcgtggatggacagcggatctctgacactacggttctgcgcagcggg
gtgaccgtccagttcggagccactcacgtcttcaaattcgtagaccccagctatgaccac
agcatgtccaagagagacccagggcccatgatgaagggcagacacaaatcaggtcccccc
atagccgaggatgccttcctgtctgccatcattaactacaccaacagctcaacggtgcac
ttcaagctgtctcccacctacgtgctgtacatgacctgccgttacgtcatgtccagccaa
taccggcctgacatcagcccctctgagcgaacacacaaggtcatcgccattgtcaacaag
atggtgagcatgatggaaggagttatccaggagattgctgaaggtgatcagaaacagaag
aacatagccggggctctggccttctggatggctaatgcctcagagctgctgaacttcttc
aaacaggacaaggatctgagtcgcatcacgctagatgcacaggatgttctcgctcacctg
gttcagatggcttttaagtacctggtgcactgcctgcagtcagatctgaataactacatg
ccagctttcctggaagatcccgatgaacagaacccacagaggcccaagatagaggacgtt
ctgcacacattaacgggcgccatgtctcttctgcggcggtgccgtgtcaacgcggccctc
acaattcagctgttctcgcagctcttccacttcatcaacatgtggctctttaacaagctg
gtgacagaggcagactcgggcctgtgctcgcactattggggcgccatcctgcgacagcag
ctcagccacatcgaggcgtgggctgagaaacagggtttggagctggccgcagactgccac
ctcagtcgcatagtgcaggcaacgaccctcctcaccatggacaaatactccatgcaagat
gtgcagaacatcaacaacacctgcttcaagctcaactctctgcagctcaacgctctgctg
agcaactaccactgcgctcctgatgaaccctacattcctcctgagctgattgatcacgtg
gtgactgtggccgagaacacggcggacgaactggcccgaagcgatgggcgggaagtacag
ttggaagaggaccctgacctccagctgcctttcctactgcccgaggacggttactcgtgc
gacgtggtgcggaacattcccaatggattccaagagttcctagagccgctttgccagaga
ggtttctgtcgattgacacctcatccacgctcttcgggaacttggaccatctattttgaa
ggagccgattgtgacagtcatttctcagctgacacatcagaactgctaatgcagaaggaa
ccggaaattgtgacagtgactttgaagaaacacaatgggatgggcctcagtattgtggca
gccaagggtgctggacaggacaaacttggcatttacatcaagtctgttgtcaaaggaggt
gcggcagacgtggatgggcgtctggctgcaggagaccagttgctcagcgtggatgggcga
agtctggtcggcctctcacaagagagggcggcggaattgatgacacgaaccggctcagtc
gtaacactcgaggtggccaaacagggagccatttaccacggtctggccacgctcctcaac
cagccatcccccatgatgccccgcgcatcagaccgtggacgtggagacaagggaaagatg
agaccaaagagcgagggctttgagctctacaacaactctgtgcagaacggctcgcctgag
agcccccagggcacgtgggacacctatcctgaaccaaagaaggaggacaggttgttgaag
aaccgtgcagaccaccgctccagcccaaatgtggctaaccaggcccagagtccaggtggg
aagcctgtttatcctggagccccaggaaagatcacttcagtctcgacgggtaacctctgc
cctgatgaggagccctctccaacccatccagaggcgtatccaatccccactcagacgtac
ccaagggaatacttcaccttcccagcctccaaatctcaggacaggatggaccctgggcag
ccctggcaaaacaatgaactggagcctctcccccctatggataaccactctaacaacagc
atggctatgcagcgggttgctcgctctcaggaggagttgtgcgacatgccgggcgggtac
ccaggtgaacacctgtgccaggaagacctgatgcacctgcagcagcagcgtgaggccgag
taccagcgaggcggtggcgaacactggaaccaccagatgtcctcctcggtggagtccagc
acctccagccaagaacacctcaactactcgtcatcctctggctccaggatccaaggcaat
cacaagagcggccctggccgctggaagaccccaatagcaccccactctggccccgtgggc
gtctcccaaccttcccgttcagatcttccacctcctcctcctcctccacctgcgcactac
gactacgagccgcaaaccgacctgccgcttcctccaccaccctccgttacgcagcagcag
gcagcagccgctgcggccactgccgaccgcaagaaacgcgaggagcaacagcgctggtat
gagaaggagaaggccaggcttgaagaggaacgagacagaaagagaagagaccaagagcgg
aagttggtgcagattcgcaaccctcccgggccagtcatgcacaacaaccagcacggtccg
ctgccgcccgcccctcagcaccaacagatgccccatccacagcttcccatgcaggtgccc
caaacataccttccaccggtccagccgccccaaccaccacagccacaacccgctcgaccc
gacaagctatccagccttccccgccagccgccacaggacacagtaatacgtgacctcttg
ccccagcagcagccacgcaccattgagagacgtgacttgcaatacatcaccatcagcaag
gaggaactgtccgccagtgacagcctgtcgcctgacccctggaagagggacgcccgtgag
aaactggagaagcagcagcagcttcacattgtggacctcctggacaaggagatccaggag
cttcaggccaaacccgaacgcacggccgaggagaatgaccgtctgcgcaaactcatgcta
gagtggcagttccagaagagactgcaggagtccaagcagaacgaggaggatgaggaggag
gaggaggatgacgaagatgtagacaccacgctaattatgcagagactggaggctgagaag
agagcacggctacaggatgaggagcgacgacggaaacagcagttggaggaaatccgtaag
cgtgaggcagaagagcgagccaaacaggaggaggagagacgctggagagaggaggagaga
gccagacgagaggccgaggagaagaggagacaggaggaagagtactacacccgcctggag
gtagagcggcgccggcagcacgaggaagctgagcgcaagctgctaacgccagacgagcct
ggtctgtacagaccccccctaccccgggactaccagcccccttctcccgcaagcacccct
gccactaacaacaacagcgcccctccgcccccacctcagagaaacacctcctacctcaaa
acccaggtcacctcccccgacaccatatacactgccaagtttgtctcgtacaatgacgag
gaggaggaggaggaggaggaggaggaggaggatgcgggcctaacaggtcaggttaagctc
tcggccacccggaagtcctacggtgaccttccgcccgccccaaagtcccagccgccgcca
accgcgcgcaagccccgtcccgtctcagatggcatctttctgtccaactcattccagctg
cccgcagcggccaatgccaacagtactgctcccaaagcagggcagccccctcaccctccc
gccaaacccagcttcatcccatcagccaactcgaaaggtagagacgctgaggagagtaaa
gggcccgacctcagccccgctcatcctccatttattattggttcattcgttttcatgttt
tgggggtttttttggtgttcgtttgttccttttcctgttctccagtggagactcggcgct
ctccattttcaacatttcctctacctttctatctgtaaattttcgtag
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integrated database retrieval system
