Sinocyclocheilus grahami (golden-line barbel): 107549680
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Entry
107549680 CDS
T04918
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E-like
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010
MAPK signaling pathway
sgh04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107549680
04020 Calcium signaling pathway
107549680
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107549680
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107549680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
107549680
NCBI-ProteinID:
XP_016086344
LinkDB
All DBs
Position
Unknown
AA seq
2386 aa
AA seq
DB search
MLELGTCSVSAQTLSDCNALAVPSFNQGMCGGSPPQQSFLLQSQDPESWLKHRGTLEDGS
HSCSLLEPQSLADSFLSHASSFDMLYVPHAHPMGLAPSSLDLGGSCEGAASLCLDPDMPV
SPNIIKRRRGGLIEQRDIIKAHQAHKIQSTPQARRKEWEMARFGDDVPGLLGAGDGGSER
SRNRDAPAVSTGGVSPAFKQTKAQRARTMALYNPIPVRQNCFTVNRSLFIFGEDNIVRKY
AKKIIEWPPFEYMILATIIANCIVLALEQHLPGEDKTPMSKRLEKTEPYFIGMFCFEAGI
KIIALGFVFHKGSYLRNGWNVMDFIVVLSGILATAGAHMNISLDLRTLRAVRVLRPLKLV
SGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHKRCVAYSNITDSE
RADSSEIDFPCGAKNCPENYNCSGPWPGPNDGITQFDNILFSILTVFQCITMEGWTAVLY
NTNDALGSTWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQI
ERELNGYRAWIDRAEEVMLAEENKNSGPSALDVLKRATTIKRRGVDDVRRSPEEQYADIS
SVGMPLNRASIRSAKRGPKSYFRRKERMLRISVRRMVKTHTFYWIVLSLVALNTFCVAIV
HHKQPQWLSSLLYFAEFLFLGLFLTEMFLKMYGLGPRLYFHSSFNCFDFGVIVGSIFEVL
WGFFRPGTSFGISVLRALRLLRIFKITKYWVSLRNLVVSLMNSMKSIISLLFLLFLFIVV
FALLGMQLFGGRFIFEDYTPTNFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVKSGM
WSSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDQEEEEEAFNQKHALQKAKEVGP
MSSFMSSERRRRPYLYRKRAIHRSRAAYSFEDSESLADARPLNASNSFMSRRERRRRLTM
SVWEQRTSQLRRHRQMSSREILFSSPSEEHDGPPGCLHHKKPGISPSNSKRIAIETTTTT
TMPEATLEPPMAMDMPVNEQALSIPIPEPPLAIPIPEPPMPVDISLPEPPVTLNLPLTEL
SESKTSPEGTLDINNHCPRLNGNRRQRAVRKYRPPAMGDTLTPDMGPRPRPRGPHHREPQ
TDARGKETPQGDGGVDSREQRPWNEGDEKDSKNDGEISPDGRVLEQRQNKPDNSESSETK
PTNSPHKNPPQDSEPATLQLTDSTLQQSPQATLGASETDNNNHGCLNQDKSSFNTSIMIE
VTDTQPSMELTSITGLSIPAPLITLLIRSARLIVPFAFTGVFTFEMIIKMIEQGLILHDG
SYFRDLWNILDFIVVVGALVAFALTNVMGSNTGRDIKTIKSLRVLRVLRPLKTIKRLPKL
KAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFYYCTDSSKDTENECKGYYID
YDKDKKKEKREWKRRDFHYDNIMWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSQGNR
MEMSIFYVIYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAISAKPL
TRYMPQNRQTLQYRLWHFVVSPVFEYTILTMIALNTIVLMMKHHDPRIEGYDNALKYLNT
VFTVIFTVECVLKILAFGIMNYFRDTWNIFDFITVLGSITEIVVDKVHTVKGFNMGFLKL
FRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLNPK
TQINEHNNFRTFFGALMLLFRSATGESWQEIMLSCLGEKDCEKDESLNNSTTNEKKDCGT
EFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDRAAC
GRIHYTDMYEMLTCMSPPLGLGKKCPSKVAYKRLVLMNMPVDEDMSVHFTSTLMALIRTA
LDIKIARGGEDRGQMDIELQKEISVIWPHLSQKSLDLFVPVHKASDMTIGKIYAAMMIMD
YYKQNKAKKLRQQLEEQKHAPMFQRMDASSLPQEILCSAKALPFLSHNAGSALSRGGFVA
LSPISPQDLFMQPLAQDSMEERDEYQHQYHLQSMMPEHKDFSSVLCPTSMEADPLQVPGR
GVSIRASSMPRLAVEPQVSSESKLMKRSFSTIGDQCVNGDWQEEFSLERVSPDRLERPRQ
RSFRAVRSNLREPVDKERGRSKERRHLLSPDVSRCNSEERSQSQERRHSRSPSEGRKHTT
LGQGNSSCSPIPSTSDSGTPRGRRQLPQTPSRPRPHISYSPLVCRAHPTQGEVQSLVLPT
EEGEGPTGTGQGTAMAHSTPHRYISEPYLSLQEDVNGPDSSGVEETLTFEAAMATSLGCS
NTISSAPQLRHNWQVPNGHFRKRLAQATSGTSGCELLSDTDEDDRC
NT seq
7161 nt
NT seq
+upstream
nt +downstream
nt
atgttggaattgggcacttgttcggtcagcgctcagaccctctctgactgcaatgccctg
gcagtcccgtctttcaatcagggcatgtgtggagggagcccgccacagcaaagtttcctc
ctccagtctcaggacccagagagctggctcaagcaccggggaaccctggaggacggctcc
cactcctgttcactcctggagccccagagcctggctgacagcttcctgtcccatgcatcc
agtttcgacatgctctatgtcccccacgcccatcccatgggtctggcaccatcctccctg
gatcttggagggtcatgcgagggggcggcctcattgtgtctggaccccgacatgcccgtc
agcccgaatatcattaaacggcgcagggggggactcattgaacaacgggacatcattaaa
gcacaccaggcacacaagatccagagcaccccacaggcccggcgcaaggaatgggaaatg
gctcgcttcggagacgatgttcccggtctgctgggagccggggatgggggttcggagcgc
agtcggaaccgggatgcaccggcggtatccacaggtggagtttcaccagccttcaaacag
accaaagcgcaacgagcccgaaccatggccctgtacaaccccatcccggtccgacagaac
tgcttcaccgtcaacagatcgctcttcatctttggagaggacaacatcgttaggaagtat
gctaaaaagatcatagaatggcctccgtttgaatatatgatcctggcaaccattatcgcc
aactgcattgtcctggccttggagcaacacctgcctggagaggacaagacacccatgtca
aaaagacttgaaaaaacagagccctactttataggaatgttttgttttgaagccggaata
aaaatcattgccttgggatttgtattccacaagggctcgtacctgaggaatggctggaac
gtcatggacttcattgtcgtcctaagtgggattctggccacagcaggagcccacatgaat
atttcattagacctgcgcacgctgagggctgtgagggtattacggccccttaaactggtt
tctggcattcctagtctgcaaatagttcttaaatccataatgaaggcgatggtgccactg
ctacagattggtctgctgctgttttttgccattctcatgtttgctattatcggactggag
ttctacagtggaaaactccacaaaagatgtgtagcttattcaaacattacagactctgag
agagcagactcatctgaaattgatttcccatgtggggccaagaattgtcctgaaaattat
aactgctccggcccgtggcccggacccaacgatggcatcactcagtttgataacatctta
ttttcaatactcactgtcttccagtgcatcaccatggaaggctggacagctgtactctat
aataccaacgatgccttaggctctacttggaattggctctacttcattcctctaataata
attggctccttctttgtgttgaatctggtattaggagtcctgtcaggggagtttgctaaa
gagcgagagcgggtggagaaccgaagagccttcatgaagctcagaagacagcaacagata
gagagggagctgaatgggtatcgggcctggatcgaccgtgcagaggaggtgatgcttgct
gaggagaacaagaattcaggaccttctgctttagatgtgctaaaaagagccaccacaata
aagagaagaggggtggatgatgttcggagatctccagaggaacagtatgctgacatatcg
tctgtagggatgccattgaacagagccagcatacgcagtgctaaaagaggaccgaagtcc
tatttccgtcggaaagaacgcatgctacggatttccgttcgccgtatggtgaagactcac
accttctactggatcgttctgagtctggtggccctcaacactttctgtgtcgccatcgta
caccacaagcagcctcagtggttgtctagtctcctttactttgcagagttcctgtttcta
ggcctgtttcttacagagatgtttctcaagatgtatggacttgggcccagactctatttc
cactcctccttcaactgctttgattttggggtgatagtaggcagtatttttgaggtgctc
tgggggttcttcagacctggcacatcctttgggatcagcgttctgcgtgccttgcggttg
ttgagaattttcaagatcacaaagtactgggtgtccctgaggaacctggttgtgtctctg
atgaactccatgaagtccattattagtttgctcttcctgcttttcctcttcattgtggtc
tttgcacttctgggcatgcagctctttggtggaaggttcatctttgaagactacacaccc
acaaattttgacacttttccagcagccatcatgacagtgtttcaaattctcactggcgag
gactggaatgaagtcatgtacaatggcatccggtctcaaggtggcgtgaagtctgggatg
tggtcgtctgtctacttcattgttctgactctgtttggaaattatacactgctcaacgtc
ttcttggctatcgctgttgacaatttggccaatgcccaggagctcacaaaggatcaagag
gaggaggaagaggcatttaatcagaaacatgccctgcagaaagccaaggaggttgggcca
atgtcctctttcatgtcctcagagaggaggagaaggccctacctgtacaggaagcgtgca
attcaccggagccgtgcggcttactcctttgaggattcagagagtctggctgatgctcgt
ccactcaatgcctctaactctttcatgtccaggagagagagaaggaggagattgaccatg
tcagtttgggagcagaggaccagccagttgcgccgacacagacagatgtccagccgcgag
atccttttcagcagccccagtgaggagcacgatggaccacctggatgccttcaccacaag
aagcctgggatatctccgtctaacagcaagcggatagccatcgagaccacaacaaccacc
accatgccggaggctaccttagagccacccatggctatggacatgcccgtgaatgagcaa
gctctgtccattcctattcctgaaccccctttagctattccaataccggagccaccaatg
cctgtggacatatccctccctgaacccccagtgacgctgaacctacccctgacagagctg
tctgaatcaaagacctcacccgagggcactctggacatcaacaaccattgccccagactg
aatggaaacaggcggcagcgggcagtccgtaagtacaggcctcctgcgatgggggacacg
ctgacccctgatatggggcccaggcccaggccccgaggcccacaccaccgtgaacctcaa
acagatgccaggggtaaagaaacaccacaaggagacggtggtgttgacagtagagaacaa
aggccatggaatgagggagatgaaaaggattcaaagaatgatggagagatcagtccagat
ggcagggtgcttgaacagaggcagaacaaaccagacaactctgaatcatcagaaaccaaa
ccaaccaattccccccacaaaaacccacctcaggactcagaacctgcaactctacagctc
actgacagcactctccagcagtccccacaggcaactttgggtgccagcgagaccgataat
aacaaccacggatgcttgaatcaggataagtcctccttcaacaccagcatcatgatagag
gtcaccgacactcagccatccatggagctgacctccattacgggtttgagcatccctgca
ccactgataaccctattgataagatcagctagactgattgttccatttgctttcactggt
gtcttcacatttgaaatgataatcaaaatgattgagcagggtttgatcttacacgatggc
tcctatttccgtgacctgtggaacattctggacttcatagttgtggtgggagctctggta
gcctttgctctcacgaatgtgatggggagtaacacaggaagagacattaaaaccatcaaa
tcactccgtgttctcagagtattgaggcctcttaagactattaaaagacttcccaaactc
aaggctgtgtttgactgtgtggtcacatcgctaaagaatgtcttcaacatcctcatcgtc
tacaagctctttatgttcatatttgcagtcattgcagtgcaacttttcaaagggaaattt
tactactgtaccgacagttccaaggacacagaaaacgagtgcaagggttactacattgac
tatgacaaagacaagaaaaaggagaaacgagagtggaagagacgtgattttcattatgat
aacataatgtgggctttgttgactctcttcactgtatccactggcgaagggtggccgcaa
gttttgcagcactctgtggatgtgaccgaggaggaccggggtcccagtcagggaaacaga
atggagatgtccatcttttatgtcatttattttgtggtgttccccttcttcttcgtcaac
atatttgtggccctcatcatcatcaccttccaagagcagggtgacaaaatgatggaggag
tgcagtctggagaaaaacgagagggcttgtatcgactttgccatcagtgccaaacctttg
actcgctatatgcctcagaacagacagaccttacagtaccggctgtggcactttgtggtg
tctcccgtatttgaatacaccatactgacgatgattgcccttaacaccattgttctcatg
atgaagcatcatgatcctcgtattgaaggttatgacaatgctctaaaatacctcaacact
gtgttcactgttattttcactgtggaatgtgttctcaagatcctggcatttggaattatg
aattatttcagagacacatggaatatatttgacttcatcacagtcctaggaagcatcact
gaaattgtggttgacaaagtccacactgtaaaaggttttaatatgggcttcctgaagtta
ttccgggcagctcggctgattaaacttctgcgtcagggctacaccattcgtattctgctc
tggacttttgtccagtccttcaaggctcttccatatgtttgtctgctaatcgccatgctg
tttttcatctatgccatcattggcatgcaggtattcggcaacatcaagctaaatcccaaa
acccaaatcaacgaacacaataactttaggacattttttggtgctctcatgctgttgttt
aggagtgcaacaggtgagtcatggcaagaaatcatgttatcgtgtttaggagagaaggat
tgtgaaaaagacgaatcactcaacaactcaacaacaaatgagaaaaaagattgtggtacc
gaatttgcatacttctactttgtctccttcatcttcttcagttcttttctgatgctaaat
ctgtttgtggccgtgatcatggataattttgagtacctgacgcgtgactcgtccattctg
ggtcctcaccacttggatgagtttgtacggatctggggagagtatgaccgtgcagcatgt
ggccgtattcattacactgatatgtacgagatgctgacctgcatgtcgccaccgcttggc
ctgggcaagaaatgcccctccaaagtggcgtataagcggttggttctgatgaacatgcca
gtggatgaggacatgtccgtccacttcacctccacacttatggccctgatacgcactgcg
ctggacattaaaatcgctcgagggggtgaggacaggggtcagatggacatagaattgcag
aaggaaatcagtgtcatctggccacacctctcccagaaatctcttgatctgtttgtaccc
gtccacaaagctagtgacatgaccattgggaagatttatgcagccatgatgatcatggac
tactacaagcagaacaaagctaagaagctccgtcaacagcttgaggaacagaaacatgca
ccgatgttccagcgcatggatgcgtcttcactgccacaggaaattctctgcagtgccaaa
gctctgccattcctgtcacacaatgcaggatctgccctgagtagaggtgggtttgtagca
ctgagtcccatatcaccccaagacctcttcatgcagcccttggcccaagacagcatggaa
gagagggatgaataccaacaccagtatcaccttcagagtatgatgccagagcacaaagac
tttagcagtgtgctgtgccccactagcatggaggctgatcctctgcaagtgccagggaga
ggtgtctctatccgagcctcttccatgcctcgcctggcggtagagccacaggtgtcttca
gagagtaaactgatgaagcgctcattctccacgatcggtgatcagtgtgtgaatggtgac
tggcaggaagagttctctctggagagggtgagcccagaccgactggaaagacccaggcaa
agaagctttagagctgtcaggtcaaacctgcgggagccagtggacaaagagagaggacgg
tctaaagagcgaagacacctgctgtctccagacgtgtctcgctgcaactcagaggaaagg
agtcagtcccaggagagacgccactctcgatcgcccagtgagggcaggaaacacacgacc
ctcggacagggaaatagttcatgcagcccaattccctccacttctgattcagggacgcct
cgagggcgccgccaactcccacagacaccttctcggcctcggccccacatctcctactct
ccgttagtgtgccgtgcccatccgacacaaggagaggtacagtcactggtactgcccaca
gaggaaggggagggtccaaccgggaccgggcaaggcaccgctatggcccactctacccct
caccgctacatctcagagccatacctgtcactgcaggaggacgttaacggtccagactca
agtggtgtagaggagactctcacttttgaggctgccatggcaaccagcctgggatgttcc
aacaccatcagctctgctccacaactacgtcataactggcaggtgcctaacgggcatttc
cgtaaacgactagcacaagccacatcagggacgtcaggctgtgagcttctcagtgacact
gatgaggatgaccggtgttag
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integrated database retrieval system
