Sinocyclocheilus grahami (golden-line barbel): 107549828
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Entry
107549828 CDS
T04918
Name
(RefSeq) POU domain, class 2, transcription factor 2-like
KO
K09364
POU domain transcription factor, class 2
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107549828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107549828
03021 Transcription machinery [BR:
sgh03021
]
107549828
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
107549828
Transcription machinery [BR:
sgh03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
107549828
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Presenilin
Motif
Other DBs
NCBI-GeneID:
107549828
NCBI-ProteinID:
XP_016086487
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MFVPLPVPLVFQRTAPDFSAWRLKSPLPLRSGNSDIRMSKAVEDDKMGTELPVDSTDSER
NSPEASDQTQPMKTSPFCLSPAPSNTKVKAEEAAAMTSVHAPPPPPAQPALPHTQLMLAG
SQLAGLAALLPAHQQLLLQQAQAQLLAAAMQQSNAAHAAHAAAAANQQQQTQQQQANQAA
AQAQSQAKPEQAPPPLLSQPIQLTAQHHLDDRLWSLQREKSMESAVSSAPSSAPPTVTAH
PEEPSDLEELEQFARTFKQRRIKLGFTQGDVGMAMGKLYGNDFSQTTISRFEALNLSFKN
MCKLKPLLEKWLNDAETMAIDNMLPSPNSLSSPLLGFEGLPGRRRKKRTSIETNVRIALE
RNFISNQKPTSEGILLMAEQLNMEKEVIRVWFCNRRQKEKRINPSSATPPLPNQPPAQMH
KTPCYSPHMMSSQGLALAATSLSTTAVSPTPSVACPLNLSGHAAMSSAPSSVTPPPLSTV
SPTPPSLSSPGLNTGSTMMGVSTGMNQAFISSNTLATMQALAASGGQMHISTLEGSGQMF
LGGAGGPGAGLRPSLFLNRPTLLPLARSAGMGLVGTPRASPPPGASGTSPDSCSVSPCSS
PASFCSLGDASPPPLGGAMAE
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcctttgccggtgccgttggtgtttcagagaaccgctcctgatttcagcgcc
tggcgactcaagtctccgctgcctctgcgctccggtaactccgatatcaggatgtctaaa
gccgtcgaggacgacaagatgggaactgagcttccagtggacagtacagactctgagagg
aacagtccagaggccagcgatcagacccagccgatgaaaacaagtcctttctgcctgtct
cccgcacccagcaacacaaaggtgaaagccgaggaggccgctgcgatgaccagtgttcac
gctcctccacctcctccagctcagccggctctgccacacacacaactcatgctggcaggc
agtcagctcgcagggctggccgctctccttcctgcacatcagcagctgttgttgcagcag
gctcaagcgcagctgttagccgcagccatgcagcagtcgaacgccgcgcatgccgcccac
gcagccgcggcggccaatcagcagcagcagacacagcagcagcaggccaatcaggcagca
gcacaagcccagtctcaagccaaacctgaacaagctccgcctccacttctgtcacagcct
atccagctcactgcccagcatcatcttgacgacaggctgtggtcattgcagagggagaag
agcatggagagcgccgtgagctccgccccctcctcagccccgcccacagtgaccgctcac
cccgaagagcccagcgatctggaggagctcgaacagtttgccagaaccttcaaacagagg
agaattaaactgggcttcacacagggggacgtaggtatggccatgggtaaactctacggc
aatgacttcagtcagaccaccatctcacgcttcgaggctctcaacctcagcttcaagaac
atgtgcaagctcaaacccttgctggagaaatggctgaacgacgcagaaaccatggccata
gacaacatgctgccgagccccaattcgctgtcctcacctctgctgggcttcgaaggcttg
cctggacgccgccgaaagaaacgcaccagcatcgagaccaacgtccgcatagccctggag
cgcaacttcatctcgaaccagaagcctacctctgaaggaatcctgctgatggccgagcag
ctcaacatggagaaagaggtcatccgagtctggttctgcaaccggcggcagaaagagaag
cgtataaaccccagcagcgccacccctcctctgcccaatcagcctccggcgcagatgcac
aaaacgccctgctacagcccgcacatgatgtccagtcagggactggctctggccgcaacc
agtctcagcacaacagccgtcagtcccacaccttctgtggcctgccctctcaacctcagt
ggacatgcagcaatgagctccgccccttcctccgtgactccgcctcctctcagcacagtc
agccccactccacccagtctcagcagccctggcctgaacacagggagcacaatgatgggt
gtaagcacaggaatgaaccaggccttcatcagcagcaacactctagccacaatgcaagcc
ctggctgccagtggtggccagatgcacatttccactcttgagggcagcggtcaaatgttc
ctgggtggagctggaggtccaggagctggacttcgcccgtccctcttcctaaaccgcccc
actttactgcccctggccaggagcgcaggcatgggtctggtcggcaccccccgggcttct
ccgcctcctggcgccagtggcacaagcccagactcctgctccgtctccccctgctcaagc
cccgcctctttctgctcattaggcgatgcctcgccgccccctctgggcggagccatggct
gagtga
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integrated database retrieval system
