Sinocyclocheilus grahami (golden-line barbel): 107550043
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Entry
107550043 CDS
T04918
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107550043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgh03400
]
107550043
DNA repair and recombination proteins [BR:
sgh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
107550043
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
107550043
NCBI-ProteinID:
XP_016086747
UniProt:
A0A672MVE3
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MAVQPKQNLSMDSASEHGFLNFYFSMPEKPDTTVRVFDRNDYYTVHGKDAVFAAKEVFKT
NGVIKNLGTGNKRLESVVLSKMNFESFVRDLLLVRQYRVELYKNASKTSKEHDWQISYKA
SPGNLTQFEEILFGSGGGPGEGAAGAVGVRLGTGADGQRVVGVGYVDSTLRKLGVCEFPD
NDQFSNLEALLVQIGPKECVLPGGDAGGDLGKLRQVVQRGGVLLTDRKKSEFTTKDIVQD
LNRLLKARKGETVSSAALPEMEKQIAMSCLQAVIKYLELLSDEANFGSFKITTFDLNQYM
RLDNAAVQALNLFQGSSDDATGTHSLAVLLNKCRTPQGQRLVNQWIKQPLIDKNKIEERL
DLVETFVEDSELRKSCQEDLLRRFPDLNRMAKKFQRQSSNLQDCYRVYQAVGQLPSLVLA
LERYCGKHQVLLHAAFISPLNDLVSDFSKYQEMIETTLDMNQVEHHEFLVKPSFDPTLSE
LRENMDRLEKAMQAALNSAARELGLEAAKTVKLESNAQIGYFFRVTCKEEKSLRNNKKFT
TLDVQKNGVRFTNSKLSSLNEEYTKSREEYEEAQNAIVKEIISIAAGYVDPVQTLNEVIA
QLDAVVSFAVVSHAAPVPYVRPKILEKGSGRLIVKAARHPCVEAQDDVAFIPNDVTFRRG
EERFHIITGPNMGGKSTYIRQVGVIVLMAQIGCFVPCDEAELSVVDCVLARVGAGDSQIK
GVSTFMAEMLETAAILRSATEDSLIIIDELGRGTSTYDGFGLAWAISEYIATRLKSFCLF
ATHFHELTALAQQVSTVRNLHVTALTTDSTLTMLYKVKKGVCDQSFGIHVAELANFPKHV
IANAREKALELEEFQDISRAGEEAGPEAKKRCLEKHEGERIIEAFLAKAKSMSVEGMSDE
AVKEELRKLKAEVIGQNNSFVSEIVTRCAKVKLTSA
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaacctaaacaaaatctgtccatggacagtgcgtctgaacatggatttctg
aatttttatttttccatgcccgagaagccggacaccaccgtgagggtgtttgatcgaaac
gattactatacggtgcacggaaaagatgcggtttttgcagccaaggaggttttcaagacg
aatggagtcatcaaaaatctgggcacaggcaataagaggttggagagtgtggtcctcagt
aagatgaactttgagtcatttgtgagggacctgctgctggtcaggcagtatcgggtggag
ttatacaaaaatgccagtaagaccagcaaagaacatgactggcagataagttacaaggcg
tctccaggaaacctgacccagtttgaggagattttgtttggcagtggaggaggtcctggg
gagggagctgccggtgctgtcggggttcgtcttggcaccggggccgatggacagcgtgtc
gtcggtgttggctatgtggacagcaccctcaggaaactcggtgtgtgtgaattcccagac
aatgatcagttttccaatctggaggctcttcttgtgcagattgggcccaaagagtgtgtg
ctccctggaggagatgcaggtggagaccttgggaaactcagacaggtggtgcagcgtggt
ggcgttctgctcacagacaggaagaaatcggagttcacaaccaaagacattgtgcaggat
ctgaatcggctcctgaaggcccgtaagggagagactgtgtccagtgctgcacttccagag
atggagaaacagattgcaatgtcttgcttacaagccgtcatcaaatacctggagcttctc
tcagatgaggccaattttggttccttcaagataaccacctttgacctcaaccagtacatg
cgtctggataatgctgctgtgcaggctctgaatctcttccaggggtcttctgatgatgct
acaggcactcactctctggcagtccttttaaacaaatgtcgtaccccacaaggacagcgg
ttggtcaaccagtggatcaaacaacctctcattgacaaaaacaagatagaagaaagactg
gatcttgtggagacttttgtggaagactctgagctgaggaagagttgtcaagaggatctt
ctccgccgttttccagacctgaaccgaatggcaaaaaagttccagcgtcagagctctaat
ttacaagactgttaccgagtctatcaggctgtggggcaactgccgagtctggtgctggcc
ttggagagatactgtgggaaacatcaggtcctcctgcacgcagcattcatctctcccctc
aacgaccttgtctctgacttctccaaatatcaggagatgattgaaaccacactggatatg
aaccaggttgagcatcatgagttcctggtgaaaccctcatttgatcccaccttgagtgag
ctcagggagaacatggatcgtttggagaaagccatgcaggcggccctgaacagtgcggct
cgtgaacttgggctggaagcagcaaagactgtgaagcttgaatccaacgcacagattggg
tactttttccgagtcacatgcaaagaagagaagagtcttcgcaacaacaagaaattcact
actttagatgttcaaaagaatggagtgcgattcactaacagtaagctgagctctttgaat
gaagagtacactaaaagcagagaagagtatgaagaggctcaaaatgccattgtcaaagag
atcatcagcatagctgcaggctatgtggatccagtacagactctgaatgaggtgatagct
cagcttgatgcagtagtgagttttgctgtggtgtcccatgctgctccagtgccttacgta
aggcctaaaatactagagaaagggtcagggagactcattgtaaaggcggcaagacatccc
tgtgttgaagcccaagatgatgtggctttcattcccaatgatgtcaccttcagaaggggt
gaggagaggtttcatatcatcacagggccaaatatgggtggtaaatctacatacattcgt
caagtgggtgtgatcgtgctgatggcacagattggctgttttgtaccatgtgatgaggca
gagttgagtgtggtggactgcgtgctcgctcgagtgggtgcaggggacagccagatcaaa
ggagtgtccacctttatggctgagatgctggagacggctgctattcttcgatcagccaca
gaggactctcttatcattattgatgaattgggcagaggcacatcaacatacgatggcttt
ggtctagcctgggcaatctcagagtacattgccacccgcctcaaatccttctgcctgttt
gccactcacttccatgaactgacagcacttgcacagcaggtttccactgtccgtaacctc
cacgtcactgccctgaccacagacagcactctaacaatgctctacaaggtgaaaaagggc
gtttgtgaccagagctttgggattcatgtggcagagcttgctaacttccccaagcatgtg
attgctaatgcacgggagaaggctttggagcttgaggagttccaagatatctccagagct
ggggaggaagctggacccgaagccaagaaacgctgcctggagaaacatgagggggagagg
atcatcgaggctttcctggctaaggctaaatcaatgtctgttgaaggcatgtctgatgag
gctgtcaaagaggagctgcgcaaactcaaggcagaggtcatcggacaaaacaatagcttc
gtcagtgagatagtgacacgttgtgccaaagtcaaactgacttcagcctga
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