Sinocyclocheilus grahami (golden-line barbel): 107550108
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Entry
107550108 CDS
T04918
Symbol
dhx36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107550108 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107550108 (dhx36)
03012 Translation factors [BR:
sgh03012
]
107550108 (dhx36)
Enzymes [BR:
sgh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107550108 (dhx36)
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
107550108 (dhx36)
Translation factors [BR:
sgh03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
107550108 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
nSTAND3
ATPase
AAA_19
NB-ARC
AAA_22
ABC_tran
NPHP3_N
TsaE
AAA_14
DEAD
Motif
Other DBs
NCBI-GeneID:
107550108
NCBI-ProteinID:
XP_016086818
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MNHGYGNRRGQRGGGRRFGDGGSRWDGGAGSSGGYTRSSEWDSREERGHGGERRGGGGGG
GGGGGRGKHPPHLKGREIGLWYAKYGGIKRSEAERKSRAVVQMDEQREQHITQLLNSVQR
DADRDAHPSTSQSWRGKEEPSGHSYFDGDDPPEPQNIVKVPKIEPKEEKQENEDELGASV
KEELDDTDLEYLFQDVVRIPSLDEELKKDLQKKKDNARYLDMLKFREKLPSYGMREELVR
LINANQVLVISGETGCGKTTQVTQFILDDFIERGMGSLCRVVCTQPRRISAISVAERVAA
ERAESVGDGKSSGYQIRLQWYSDSTTDALEMMDDDDKINLQLIVALIRHIVMKEDALSQK
ASSALVVILQVTLWVLFLPGWDNISTLNDLLTADQIFKSDRFIIIPLHSLMPTVSQTQVF
KKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIRTMTAEWVSLANAK
QRKGRAGRVSPGKCYHLYNGLRASLLDNYQLPEIQRTPLEELCLQIKILKLGPIASFLRK
TMDPPADKAIELAITHLVDLNALDRNEELTPLGFHLARMPVEPHIGKMILFGALLGCLDP
VLTIAASLGFKDPFFIPLGKEKIADQRRKILSLNSRSDHLTIVNAFWGWEDAKKKGSRFE
KEYCWDNFLSANTLQMLQNMKGQFAEHLLAAGFVNSKDPKDPSSNVNSENEKLIKAVIVA
GLYPKVAKIRPNHSKKRPMPVKVYTKADGKVCIHPKSVNAEETQFHYTWLIYHLKMKTTS
VRTFLICPKVRLSTLANKIVPNKLTHTHTLMQCSFTHFKGKDYCI
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatgggtatggtaatagacgtggtcagagaggagggggtcggcgtttcggagat
ggaggttccagatgggatggaggggctggatccagtggaggatacacgaggagctccgag
tgggactcaagggaagagcggggacatggaggggaacgaagaggaggaggaggaggagga
ggaggaggaggaggaagaggcaaacatccaccccatttgaagggtcgagaaataggactg
tggtatgccaagtatggaggaattaaaagatctgaggcagagaggaaatctagggctgtt
gttcagatggatgaacaacgagagcagcacattacacagctgctgaactctgtccagaga
gatgcagacagagacgcgcacccctccacatctcagagctggagggggaaggaggagccc
agtggccacagttactttgatggagatgatcctccagaacctcagaacattgtaaaagtg
ccaaaaattgagcctaaagaggagaaacaggagaatgaggatgagttgggagcaagtgtg
aaagaggaacttgatgacactgaccttgagtacttattccaagatgttgtgcggataccc
tccctggatgaggagctcaagaaagatctgcagaagaaaaaagataatgctagatacctt
gatatgctgaaattcagagagaagctgccttcctatgggatgagagaggagctggttagg
ctaatcaatgctaaccaggtactggtaatcagtggagagactggctgtgggaagaccacc
caggttactcagttcatccttgatgacttcattgagaggggcatgggctctctctgcagg
gtggtttgcacacagccaaggcgtatcagcgccatatctgttgcagagagggtggctgca
gaacgggcagagtcggtgggagacgggaagtcctctgggtatcagatccgtctgcagtgg
tactcagacagcaccaccgatgcgctggagatgatggatgatgatgacaagatcaacctg
cagcttatcgtagcattgatcagacacatcgtgatgaaagaggatgcactgtctcaaaag
gcatcatcagcccttgtggttatcctccaagtcacgctttgggttttgtttctgcctgga
tgggacaacatcagcaccctgaatgatttgctcacggctgaccagatttttaagtcagat
cggtttatcatcatcccgctccactctttgatgcccacagtgtctcagactcaggtgttc
aaaaagccacccccgggagtgcgcaagattgtcatcgctaccaacatcgcagaaaccagt
atcacaatagatgatgtcgtgtatgtgatagatggagggaagataaaagaaactcatttt
gacactcagaacaatatcaggaccatgacagcagagtgggtgagcttagccaatgccaaa
cagaggaagggccgtgctggcagagtgtctcctgggaaatgctatcacctgtataatgga
ctgagggccagccttctggataactaccagttacctgagatccaacgcactccactggaa
gagctttgcttgcaaataaagatactgaagttgggaccaattgcatctttcctgcgaaaa
accatggaccccccggcagacaaagcgatcgagctggccatcacacacctggtggacctg
aatgccctggaccggaatgaagagttaactccattaggatttcatctcgcccgcatgcct
gtagagcctcacataggaaaaatgattctgttcggggctcttctgggctgtttggaccct
gtgcttaccattgcggccagccttggctttaaagatcccttcttcataccactgggaaag
gagaagattgcggaccagaggaggaaaatcctctccctaaactctagaagtgatcatctc
actattgtcaatgcattttggggctgggaggatgctaagaaaaaaggcagcaggtttgag
aaggaatactgctgggataatttcctttctgccaacacgctacagatgcttcaaaatatg
aagggtcagtttgcagagcatcttttggcagctggctttgtgaatagtaaggaccctaaa
gatcccagctctaacgtcaactcggagaatgagaagctgattaaggctgtgattgtagca
ggtttgtaccctaaagtggccaagattcgccccaaccatagtaagaagagaccaatgcca
gtgaaggtttacactaaggctgatgggaaagtttgtatccaccctaaatctgtcaacgca
gaggaaactcagttccactacacatggctcatttatcacctgaagatgaagaccaccagt
gtacgtacatttttaatatgccccaaagtgaggttgtcaactttagctaacaaaattgtc
cccaataaactcacacacacacacacacttatgcagtgttcattcactcatttcaaaggg
aaggactactgtatataa
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