Sinocyclocheilus grahami (golden-line barbel): 107550894
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Entry
107550894 CDS
T04918
Name
(RefSeq) pre-mRNA-processing factor 39-like isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sgh03041
]
107550894
Spliceosome [BR:
sgh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107550894
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
TPR_19
HAT_Syf1_CNRKL1_C
TPR_16
TPR_15
PPR_1
TPR_MalT
HrpB1_HrpK
TPR_11
DUF5858
DUF3501
Motif
Other DBs
NCBI-GeneID:
107550894
NCBI-ProteinID:
XP_016087823
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MAAEGTEDLGNNGELTNPSVTELYEPEVADLPKTDVEESAESGADGGDTGAPTTPYTAEG
EEEEEGEMPPDFQRLWKLTSDNPQDFNSWTDLLQYCEQEGHMRACRQALNAFLLRYPLCY
GYWKKFADLERQAGHVDKAEEVCERGLKAVPLSVDLWIHYINLLLGTLNMNLPESTQRIR
SVFEEAVAAAGWDFHSDRLWDLYAEWEKEQGNLNFITSVYDRVLRVPTQLYNTHYEKLKA
HLTSHPPQDVLSPEEYSKVRNEYKQSQIQAKKERSDISAEEEERPPGEEEPADNGKDTEE
AVQKMQELLMASREELYQQNEAEVRKRWNFEDAIKRPYFHVKPLDRAQLKAWQSYLDWEI
AEAETAAVDAEGAAVEGHEGSKQECVAGHKRVLILFERCLIACALYEEFWNKYVHYLAPH
GLEEVRNVYRRACEIHLPYKHSIRLQWALFEEKHGNITEAQRILESLEMTVPGLAAVRLR
RVGLERRAGRLDVAEALLKEMVEKSKDNPQLHAFYSIKLARFLHKLCKSPSRARTVLQEA
IELSPDNGRLYHNLLELEMSGDLRANGGGILQCVAKALAAPLSPKTKILFSQRGLQFAED
FGTTVQSVLSMYEEHQKLLKEHDAEKGDNDETEKMSKMDDASASTVPQTAPPTMPHVPMT
TPPPSMMGGDMSGSYGSYGSWYQQQQYEGYGSYQNPWNQYNQYYPPS
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaaggcacagaggacctgggcaacaacggggaactcacaaacccttcagtg
acagagctttatgagcctgaggttgcagaccttcccaagacagatgttgaggagtcagcg
gagagtggtgcagatggaggggacacaggcgctccaacaacaccctacacagcggaagga
gaagaggaggaagagggagagatgcctccagactttcagagactttggaaacttaccagc
gacaatcctcaagatttcaacagctggacagacctcctgcagtattgtgaacaagagggc
cacatgagagcttgccgtcaagccctaaatgcgtttctgctgaggtatcctctgtgttac
ggttactggaaaaagtttgcggatcttgagagacaggccggtcacgttgataaggctgaa
gaggtgtgtgaacgaggtttgaaggcagtccctctcagtgttgatctctggattcactac
atcaacctgctgctgggaacgctcaacatgaacctgcctgagtcaacacagcgcatccgc
agtgtgtttgaggaggcagttgcagccgctggctgggacttccattcagacaggctgtgg
gatctgtacgccgagtgggagaaggagcaggggaacctgaatttcattaccagcgtctac
gaccgagtactgagggtccccacacagctctacaacacacattatgaaaaactgaaagct
cacctaacctcccacccgcctcaggacgtcctgtcccctgaggagtacagtaaagtgagg
aatgagtacaaacagagccagattcaagccaaaaaagagagatctgatatcagtgctgaa
gaagaagagagaccgcccggggaggaagagcctgcagacaatggcaaggacacggaagaa
gcagtgcagaagatgcaggagctcctaatggccagcagagaggaattgtaccaacaaaat
gaagcagaagtcaggaagagatggaactttgaagatgctattaaaaggccttatttccat
gtgaagcctctggatagagcccagctgaaagcctggcagagctatctggactgggagatt
gcagaagctgaaacagcagcagtggatgctgaaggggctgctgtggaaggccatgaaggc
tcaaaacaagagtgtgtagctgggcacaagagagtactaattctgtttgaacgctgtctc
attgcttgtgcactctatgaggaattctggaataaatatgtgcattacctggcaccacac
gggctggaggaggtgcgtaatgtgtaccgcagagcttgtgaaatccatcttccgtacaaa
cacagcatccgccttcagtgggccttgtttgaggaaaaacatggtaatattactgaggca
cagcgtattctagaatcacttgagatgacagtgcccggtttggccgcggtgcgtctgaga
agagtgggtctggagcggagagcaggacgtttggatgtggcggaggcactgctgaaggag
atggtggagaagagtaaagacaacccccaactccatgccttctactccatcaaactggct
cgctttcttcataagctgtgcaagagcccttccagggcccgcactgttctacaggaagcc
atagagctgagtccggataacggtagattgtatcacaaccttctggagctggagatgtca
ggtgatctgcgggctaatggaggtgggattctgcagtgtgtggccaaagcccttgctgct
cctctctccccaaagaccaaaatccttttctcccaacgtggcctgcaatttgctgaggac
tttgggaccacagtacagagtgtgttgagcatgtatgaggagcaccagaaactgctgaag
gaacatgatgcagagaaaggtgataacgatgagacagaaaagatgagcaaaatggatgat
gcatctgcctcgacagtgccacagacggctccacccacaatgcctcatgttcccatgaca
acaccacctccctctatgatgggcggagacatgagtggatcatatgggagttatggcagc
tggtaccagcagcaacagtatgaagggtatggcagctaccagaacccgtggaaccagtac
aatcaatactaccctcccagctaa
DBGET
integrated database retrieval system
