Sinocyclocheilus grahami (golden-line barbel): 107551222
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Entry
107551222 CDS
T04918
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107551222
04121 Ubiquitin system [BR:
sgh04121
]
107551222
Enzymes [BR:
sgh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107551222
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107551222
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107551222
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
zf-B_box
DUF5128
SGL
zf-RING_5
zf-C3HC4
zf-RING_2
Invasin_D3
DUF4094
BBP1_C
Motif
Other DBs
NCBI-GeneID:
107551222
NCBI-ProteinID:
XP_016088247
UniProt:
A0A672M1U9
LinkDB
All DBs
Position
Unknown
AA seq
821 aa
AA seq
DB search
MCEVILWSSAQMASFPDSDLQTCPLCKELCGCSAPISSNSSTSSSSSQTSNSSSTSSTRR
LHVLPCLHAFCRQCLEGHRSPGDPLKLRCPTCDQKVSLSESGVDALPSSNFLFSNLLDVV
VSAEEQGKNGRPSSVVHHGGLLRPHHLSNPQCSSCDEGNPATSHCLDCQEYLCDNCVRAH
QRVRLTKDHFIESLHLANRTNNSNIPINISQSFHSSFSMLNVFQDRMDFFCQQHDNAVLR
FFCDSCSVPICRECSLGRHAGHSFTYLQEALQDSRALTIQLLADAQQGRQAVQLSIEKAQ
AIAEQVELKAKVVQSEVKTITLRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLHQN
LTKLDSTISAVTQVLEEGRSIDVLLAREHMLNQLQELKSLRCILQPQEDDRIMFTPPDQA
LLIAIKSMGLISSGAFATASKAHGEGLKRALQGKLASFTVVGYDHDGEPRLSGGDSVSVV
LMSPDGNLSSADVSDHQDGTYTVSYLPKSEGEYLLSVLICNQHIEGSPFKVMVKSGRSYG
GVGLPIASFGGEGDVDGQLCRPWGICVDKEGYVVVADRSNNRVQIFKPCGTFHHKFGTLG
SRPGQFDRPAGVACDSQRRIIVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVA
VNSEGKILVSDTRNHRVQLFGPDGTFLNKYGFEGALWKHFDSPRGVAFNQEGHLVVTDFN
NHRLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQEDRIIVADSRNHRIQVFEPNGNF
LCKFGTHGNGFGQMDRPSGIAVTPDGMIVAVDFGNNRILMF
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaagttattttgtggtcctctgcgcaaatggcgtctttcccagactccgacctg
caaacatgtccgctgtgcaaggagctgtgcggctgctctgctccgatctcctccaattca
tctacctcctcctcgtcctcccagacctccaactcctcatctacctcatccaccaggagg
ctgcacgtcttgccctgtttgcacgccttttgcaggcaatgcctggagggccacaggagc
ccaggtgaccctctgaagctcagatgccccacatgcgaccaaaaagtgtctctgtcggaa
tcaggcgtggatgcgctgccttcctccaactttctcttcagcaacctgctggatgtggtg
gtctccgctgaggaacagggcaagaacggtcggccttcatcggtggtccatcacggtggt
cttctgagaccccatcacctctcaaaccctcagtgcagctcttgtgatgagggcaacccc
gctacctcccactgcctggactgccaggagtacctttgcgataactgcgtcagggcccac
cagagggtccgactcaccaaagaccacttcatcgagagtttacacctggccaaccgcacc
aacaactccaacatcccgatcaacatctcccagtccttccacagcagcttctccatgctg
aatgttttccaggataggatggacttcttctgccagcagcatgataacgcggtgctgcgt
tttttctgcgacagctgctccgtgccgatttgtagagagtgcagcttgggcaggcatgcg
ggtcacagtttcacctacctgcaggaagcactgcaggactccagagcgctgaccatccag
ctgctcgcagacgcacagcagggcagacaggctgtacagctgagcatcgagaaagcccag
gccattgctgaacaggtagagctgaaggctaaggttgttcagtcagaagtaaaaaccatc
actcttcgtcataagaaagctctggaggaacgtgagtgtgagctgctctggaaggtggag
aagattcgccaggtgaaggcaaaatcactttacctgcaggttgagaaactacaccagaat
ctcaccaagctggatagtactatctccgcagtgacgcaggttctagaagagggccgtagc
atagatgtcctgctagcacgagagcacatgctaaatcagctacaggagcttaaatccctc
cgctgcatcctacagccccaagaagatgatcgcatcatgttcacccctccagaccaggct
cttctgattgccatcaagtccatgggcctcatcagcagcggagccttcgccacagcttcc
aaagctcatggtgaaggcctcaagagagcactgcaaggaaagctagcttcctttaccgtc
gtagggtatgatcatgacggtgagcctcgcttgtccggtggtgacagcgtctcagttgtg
cttatgagtccggatggtaatctgtccagtgcagatgtttccgaccaccaagatggaacg
tacacagtcagctatctgcccaagagcgagggtgagtatttgctctcggtgcttatatgc
aatcagcacattgagggaagtcctttcaaagtgatggtcaaatccggtcgcagttacggc
ggtgtaggcctgcccattgcatctttcggaggagagggcgatgtggacgggcagctgtgt
cggccttggggcatctgcgtggataaggagggctatgtggtggtcgctgaccgaagcaac
aaccgtgtgcagatcttcaagccttgtggcacgttccaccacaagtttggcactttgggc
tcacgaccgggccagtttgaccgccctgctggggtcgcctgtgacagccagaggagaatc
attgtggcagataaggacaatcaccgcatccagatcttcacctttgagggtcagtttctt
ctcaagtttggtgagaagggaaccaaaaatggacagttcaactatccatgggatgtggcc
gtcaactctgaaggcaagatcctggtttcagatacacgcaaccaccgcgtgcaactcttt
ggacctgatgggactttcctcaacaaatacggattcgaaggtgccctctggaaacatttt
gattcgcctcgcggtgtggccttcaatcaggaaggccacctcgttgtgaccgacttcaac
aatcatcggctgcttgtcatcaggcccgactgccagtcagcacgcttcctcgggtctgag
ggaaccggaaatggccagttcttgcggccgcaaggcgtagctgtggaccaggaggatcgt
attatcgtggccgactcccgcaaccatcgcattcaggtgttcgaacccaatggcaacttt
ttatgcaagtttgggacacacggtaacggcttcgggcaaatggatcgcccttcgggtata
gcggttaccccagatggaatgatcgtggctgtggactttggaaacaaccgaatcctcatg
ttctga
DBGET
integrated database retrieval system
