Sinocyclocheilus grahami (golden-line barbel): 107551552
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Entry
107551552 CDS
T04918
Name
(RefSeq) transcription factor Sox-18-like
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107551552
Transcription factors [BR:
sgh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107551552
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
107551552
NCBI-ProteinID:
XP_016088680
UniProt:
A0A672R9A3
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MNISESSCCQEASSQPSQVAERGTWGASSSTPGPDRAHGFDRSRTTELAPVPASGTRTGS
QTGGEARTGSPDSTRPGALTLGSGEGKSGGDSRIRRPMNAFMVWAKDERKRLALQNPDLH
NAVLSKMLGQSWKALSTLDKRPFVEEAERLRLQHLQDHPNYKYRPRRKKQPKKMKRVEPG
LLLQGLAGGPGPGDAYSPHRHAHHLLPPLGHFRDLHSSGAPELESFGLPTPEMSPLDVLE
EGGGDSVFFPPHMQEDVGLGSWINYHQHPNHQTGHHPHHNSHNLQHSHPHLNQKSPLACL
PLQEKCLVVESTNLNGLYPNMSLPESSKATHTPTPAGYYGQIYGSSQSQPAFTSHLGQLS
PPPETSAVAQVTPPSLDAVDQLGPTAEFWGEVDRIEFDQYLSASRTRLSRNAPCEESSAL
ISALSDASSAVYYSACITG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaatatatctgagtctagttgctgtcaagaggccagttctcagcccagccaggttgcg
gagcgtgggacatggggtgcctcttccagcactccgggccctgaccgggcacatggtttt
gaccgcagccggaccacagagctggcgccagtgcccgcctctggaacacggacggggtcc
caaaccggaggagaggccaggacgggaagcccggactcaacccgccctggagctctgacc
ctgggctccggcgaggggaaatcagggggggattcgaggatcaggaggccgatgaatgcc
ttcatggtgtgggctaaagatgagcgcaaacgtctggccctccagaacccagacctgcat
aacgccgtactcagtaagatgctgggtcaatcctggaaggctctaagcacactagacaag
cgtccgtttgtggaggaagccgaacgactccgtttgcagcacctacaggatcacccgaac
tacaaataccgtcctcgccgcaagaagcagcccaagaagatgaaacgagtggaaccgggt
ttgctcctccaaggcctcgctggcggcccgggaccaggagatgcctactcgccacatcgc
catgcacatcatctgctgcctcctctgggacacttccgagacctccactcctccggagct
ccagagctggaaagttttggcctgccgacgccggagatgtcaccgctggacgtgttggag
gagggaggcggagattcagtgtttttcccccctcacatgcaggaagatgtgggtctgggt
tcgtggataaactaccaccagcatccaaaccatcagactggccaccaccctcaccacaac
tcccataacctccagcattcccacccacacctcaaccagaagtctccactggcctgcctc
ccgctgcaggagaaatgcctggttgtggagtccacgaaccttaacgggctctaccccaac
atgagcctcccagaatcctcaaaggctactcacactcccacgcctgcaggctattacggt
cagatatacgggagcagtcagtcccaacctgccttcacctctcatctgggccagctgtct
ccaccgcccgagacctcggcggtcgctcaggtcactccgccctctctggacgctgtggac
cagctgggacccacggctgagttctggggcgaagtggacaggattgagttcgaccaatac
ctgagcgcgagcaggactcgattgagcaggaatgccccttgcgaggagagcagcgctttg
atatcagccctgtccgacgccagcagtgctgtctactacagcgcgtgcattacgggataa
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