Sinocyclocheilus grahami (golden-line barbel): 107551788
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Entry
107551788 CDS
T04918
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
107551788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107551788
Enzymes [BR:
sgh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107551788
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107551788
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-RING_11
zf-rbx1
WWE_5
zf-RING_2
PHD_NSD
zf_RING_Vps8
zf-RING_Vps41
zf_RING_Vps8_fungal
zf-ANAPC11
zf-UDP
zf-RING_16
PHD
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
107551788
NCBI-ProteinID:
XP_016089004
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MLRSHADTKLLASAVVVWEWLNEHGRWRPYSPAVSHHIEAVIRSDPRGGSVVLGRADSRL
SPYIIDLHSMHQFRQDTGTLRPVRRSFYNPTSAPGQGWIWEWENDAGSWTTYDMEVIIAL
QAAWDRQQPWLDLTSMGFCYFVDFQTMTQINRQTQQQRRIQRHSDMVYPLLSGPLSKTSQ
AWGTGSGSGGIAKGLTSGGGSNGALLGVGVSGSTLSRKGSAVYPSGTLSVSSLAPPGQPC
TCQQCMLVLSVKANGTSSQTLGRATKPNSPKSNFGTLTSTSASMSVLNSHSHTLPHSTSL
KCSLSEEAKNSATFDQSLSLLTSGTANLSVSSSRPPPPTLPSPNQQPSSAPSSSSSATFV
PTAMLINTSTSRSSSTDLTSSSTSLPSQRSAACAAPLPSRASLTGLSRPALQRIAMAQSR
ALIASGVPTVPVKNLNDSSTVHPALAGITGILMSAAGLPVCLTRPPKLVLHPPPVNKSDI
RPIPGIGKCCRKTTKKQARKGRTPEEVVKRYLQKVRNPPEEDCTICMEALEGPSGYKGPG
VPSVSHAESVGRLAQCGHLYHLQCLVAMYNNGNKDGSLQCPTCKTIYGVKTGNQPPGKME
YHVIPHSLPGHPDCKTIRIIYNIPPGIQGPEHPNPGKPFTARGFPRHCYLPDNEKGRKAL
RLLLVAWDRRLIFSVGTSSTTGESDTVIWNEIHHKTEFGSNLTGHGYPDSGYIDNVLDEL
KAQGITEDEEQQL
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgatctcacgcggacacgaagttgctggcctccgccgtggtggtctgggaatgg
ctgaacgagcacgggcgctggcggccgtacagccctgccgtgtctcaccacatagaggcg
gtgattagaagcgatccccgcggcggcagcgtcgttttaggccgagctgacagccgcctg
tcgccctacatcatcgatctacactccatgcatcagttcagacaggataccggtacgtta
agaccagtgcgacggagtttctataaccccacctcagcaccaggccaaggttggatatgg
gagtgggaaaatgacgcaggttcctggacgacctatgacatggaggtgatcattgccttg
caagcagcatgggaccgacagcaaccctggctggatctgacatcgatgggcttttgttac
tttgtggacttccagaccatgacccagattaacaggcaaacacagcagcagcggcgcatc
cagagacactcagacatggtttacccactactctctgggccactgtctaaaacctcacag
gcttggggtacaggctcagggtctggaggcattgctaaaggacttacatcaggtgggggc
tcaaacggggcacttcttggggtaggtgtttctggatctaccttgagtagaaaaggaagt
gcggtttacccaagcgggacgctttcggtatcatctctcgctcctcctggacagccatgc
acctgccagcagtgcatgctggtgttgagtgtaaaggcaaatggcacctcatcacagaca
ctgggacgtgcaacaaagccaaacagtcctaaatccaactttgggacacttacatccacc
tctgcgtccatgtctgttttaaactcccattctcatacactaccacatagcacgtcttta
aaatgctcgctctcggaagaagccaagaattctgctacttttgatcagtcattgtctctt
ctcacatcgggcactgccaatctctcagtctcctccagccgcccaccgcctccaactctg
ccatcgccgaatcagcagccttcatccgccccaagctcttcatcttctgcaacatttgtg
ccaaccgccatgcttattaacacatcaaccagtcgctcatcatccacagatttgacgtca
tcttcaacatcgttgccttctcaacgctcagctgcctgtgctgcccctctgccatctcgt
gccagtctgacagggcttagtcggcctgctttgcagagaattgccatggcacagtcacgg
gcccttattgcctctggggtaccgacagtaccagtgaagaatcttaatgactccagcact
gtccatccggctttagctggtattacgggtattctgatgagtgcagcaggactaccagta
tgtttgacccgtccaccaaaactagttctgcatcccccacctgtcaacaagagtgacata
agaccaattcctggcattgggaagtgttgccgcaagaccaccaagaaacaagcacgcaaa
ggtagaacacctgaggaagtggtaaaaaggtacttgcagaaggtcaggaatccaccagaa
gaagattgtactatctgtatggaggctctagagggaccctcggggtataagggtcctggt
gtaccaagtgtttcacatgcagagtcggttggaagactggcacaatgtgggcatctttat
cacctgcagtgcctagtggccatgtacaacaatggcaacaaagatggcagcctgcagtgt
cccacatgcaagacaatatatggagtaaagacaggcaaccagccacccggtaagatggag
taccatgtcatcccgcactcacttccaggacacccagactgcaaaaccattcgcatcatc
tacaacataccgcccgggatacagggtcctgagcatccaaatccagggaagccttttacg
gcaagaggatttccccgtcactgctatcttccagacaatgaaaaaggacgcaaggcattg
aggctgttattggtggcgtgggatcgacggctgatcttctcagtgggcacctccagcacc
acaggagaatcagacactgtcatctggaatgagatccatcacaagacagaatttggctcc
aatcttactggacatggctatccagattctggctatattgacaatgtactagacgagctt
aaagcccagggcatcactgaagacgaggaacagcaactgtga
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integrated database retrieval system
